Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF44Q7L0R7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF44Q7L0R7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF44Q7L0R7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF44Q7L0R7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF44Q7L0R7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF44Q7L0R7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF44Q7L0R7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF44Q7L0R7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF44Q7L0R7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF44Q7L0R7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF44Q7L0R7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF44Q7L0R7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF44Q7L0R7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 AC092171.4-201ENST00000609130 632 ntBASIC21.5■■□□□ 1.03
RNF44Q7L0R7 AC241377.3-202ENST00000626088 1088 ntBASIC21.5■■□□□ 1.03
RNF44Q7L0R7 AC241585.3-202ENST00000628937 1088 ntBASIC21.5■■□□□ 1.03
RNF44Q7L0R7 AC245100.8-202ENST00000629247 1058 ntBASIC21.5■■□□□ 1.03
RNF44Q7L0R7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF44Q7L0R7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 AC099791.2-201ENST00000605725 427 ntBASIC21.49■■□□□ 1.03
RNF44Q7L0R7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RNF44Q7L0R7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF44Q7L0R7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF44Q7L0R7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 AC096631.2-201ENST00000436136 790 ntBASIC21.46■■□□□ 1.03
RNF44Q7L0R7 DUX4L19-201ENST00000557448 1267 ntBASIC21.46■■□□□ 1.03
RNF44Q7L0R7 AC144652.1-201ENST00000609974 1624 ntBASIC21.46■■□□□ 1.03
RNF44Q7L0R7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF44Q7L0R7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 AC110285.6-201ENST00000617652 491 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms