Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ARFGEF3Q5TH69 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 AC092171.4-201ENST00000609130 632 ntBASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.15■□□□□ 0.66
ARFGEF3Q5TH69 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ARFGEF3Q5TH69 SLC47A1P1-202ENST00000449666 945 ntBASIC19.14■□□□□ 0.65
ARFGEF3Q5TH69 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ARFGEF3Q5TH69 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARFGEF3Q5TH69 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ARFGEF3Q5TH69 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
ARFGEF3Q5TH69 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 AC091305.1-201ENST00000479476 895 ntBASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 AC136469.2-201ENST00000623944 1028 ntBASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 AC008764.7-201ENST00000593779 1081 ntBASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 CA15P2-201ENST00000611168 834 ntBASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARFGEF3Q5TH69 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 LINC01124-201ENST00000409786 2117 ntBASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARFGEF3Q5TH69 AC099791.1-201ENST00000416440 715 ntBASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 AC027682.1-201ENST00000562846 899 ntBASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 MIR3181-201ENST00000578512 73 ntBASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARFGEF3Q5TH69 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 BX842568.3-201ENST00000418104 571 ntBASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 AC009086.3-201ENST00000623486 1008 ntBASIC19.09■□□□□ 0.65
ARFGEF3Q5TH69 AC004812.2-201ENST00000611079 2094 ntBASIC19.08■□□□□ 0.65
ARFGEF3Q5TH69 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ARFGEF3Q5TH69 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms