Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CDCA8Q53HL2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CDCA8Q53HL2 AC006455.2-201ENST00000429931 906 ntBASIC31.19■■■□□ 2.58
CDCA8Q53HL2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.19■■■□□ 2.58
CDCA8Q53HL2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.19■■■□□ 2.58
CDCA8Q53HL2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.19■■■□□ 2.58
CDCA8Q53HL2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CDCA8Q53HL2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDCA8Q53HL2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
CDCA8Q53HL2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA8Q53HL2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA8Q53HL2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA8Q53HL2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA8Q53HL2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA8Q53HL2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.18■■■□□ 2.58
CDCA8Q53HL2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDCA8Q53HL2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDCA8Q53HL2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDCA8Q53HL2 DUX4L4-201ENST00000566884 1269 ntBASIC31.17■■■□□ 2.58
CDCA8Q53HL2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDCA8Q53HL2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
CDCA8Q53HL2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDCA8Q53HL2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 MIR3181-201ENST00000578512 73 ntBASIC31.16■■■□□ 2.58
CDCA8Q53HL2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDCA8Q53HL2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.15■■■□□ 2.58
CDCA8Q53HL2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDCA8Q53HL2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDCA8Q53HL2 EDA-201ENST00000338901 1233 ntBASIC31.15■■■□□ 2.58
CDCA8Q53HL2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC31.15■■■□□ 2.58
CDCA8Q53HL2 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.15■■■□□ 2.58
CDCA8Q53HL2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDCA8Q53HL2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.15■■■□□ 2.58
CDCA8Q53HL2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC31.15■■■□□ 2.58
CDCA8Q53HL2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CDCA8Q53HL2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CDCA8Q53HL2 AC005837.3-201ENST00000612163 286 ntBASIC31.14■■■□□ 2.58
CDCA8Q53HL2 LINC01529-204ENST00000636474 1715 ntBASIC31.14■■■□□ 2.58
CDCA8Q53HL2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.14■■■□□ 2.57
CDCA8Q53HL2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
CDCA8Q53HL2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDCA8Q53HL2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDCA8Q53HL2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.13■■■□□ 2.57
CDCA8Q53HL2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.13■■■□□ 2.57
CDCA8Q53HL2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CDCA8Q53HL2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.13■■■□□ 2.57
CDCA8Q53HL2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 AC136469.2-201ENST00000623944 1028 ntBASIC31.12■■■□□ 2.57
CDCA8Q53HL2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDCA8Q53HL2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDCA8Q53HL2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDCA8Q53HL2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.11■■■□□ 2.57
CDCA8Q53HL2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.11■■■□□ 2.57
CDCA8Q53HL2 pRNA.6-201ENST00000610482 90 ntBASIC31.11■■■□□ 2.57
CDCA8Q53HL2 pRNA.5-201ENST00000612139 90 ntBASIC31.11■■■□□ 2.57
CDCA8Q53HL2 pRNA.11-201ENST00000618423 90 ntBASIC31.11■■■□□ 2.57
CDCA8Q53HL2 pRNA.13-201ENST00000619112 90 ntBASIC31.11■■■□□ 2.57
CDCA8Q53HL2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDCA8Q53HL2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDCA8Q53HL2 AC019069.1-201ENST00000610008 1333 ntBASIC31.1■■■□□ 2.57
CDCA8Q53HL2 AL499627.2-201ENST00000606283 725 ntBASIC31.09■■■□□ 2.57
CDCA8Q53HL2 AL355001.2-201ENST00000620617 1191 ntBASIC31.09■■■□□ 2.57
CDCA8Q53HL2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
CDCA8Q53HL2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDCA8Q53HL2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.09■■■□□ 2.57
CDCA8Q53HL2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CDCA8Q53HL2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDCA8Q53HL2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDCA8Q53HL2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.08■■■□□ 2.57
CDCA8Q53HL2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDCA8Q53HL2 MIR4767-201ENST00000582827 78 ntBASIC31.08■■■□□ 2.57
CDCA8Q53HL2 AL031432.3-201ENST00000607698 485 ntBASIC31.08■■■□□ 2.57
CDCA8Q53HL2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC31.08■■■□□ 2.57
CDCA8Q53HL2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CDCA8Q53HL2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.07■■■□□ 2.56
CDCA8Q53HL2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.56
CDCA8Q53HL2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
CDCA8Q53HL2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDCA8Q53HL2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.07■■■□□ 2.56
CDCA8Q53HL2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.07■■■□□ 2.56
CDCA8Q53HL2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CDCA8Q53HL2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CDCA8Q53HL2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.06■■■□□ 2.56
CDCA8Q53HL2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.06■■■□□ 2.56
CDCA8Q53HL2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC31.06■■■□□ 2.56
CDCA8Q53HL2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms