Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.45■■□□□ 1.5
DCAF4L1Q3SXM0 AC142381.2-201ENST00000566120 298 ntBASIC24.45■■□□□ 1.5
DCAF4L1Q3SXM0 AC136469.2-201ENST00000623944 1028 ntBASIC24.45■■□□□ 1.5
DCAF4L1Q3SXM0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
DCAF4L1Q3SXM0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DCAF4L1Q3SXM0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
DCAF4L1Q3SXM0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 pRNA.6-201ENST00000610482 90 ntBASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 pRNA.5-201ENST00000612139 90 ntBASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 pRNA.11-201ENST00000618423 90 ntBASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 pRNA.13-201ENST00000619112 90 ntBASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
DCAF4L1Q3SXM0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 SUDS3P1-201ENST00000505831 966 ntBASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 AC144652.1-201ENST00000609974 1624 ntBASIC24.43■■□□□ 1.5
DCAF4L1Q3SXM0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DCAF4L1Q3SXM0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DCAF4L1Q3SXM0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 AP001330.3-201ENST00000520123 633 ntBASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 DUX4L4-201ENST00000566884 1269 ntBASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 ABCB10P4-201ENST00000566803 2184 ntBASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DCAF4L1Q3SXM0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.39■■□□□ 1.5
DCAF4L1Q3SXM0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
DCAF4L1Q3SXM0 AF213884.3-201ENST00000563833 479 ntBASIC24.39■■□□□ 1.49
DCAF4L1Q3SXM0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.39■■□□□ 1.49
DCAF4L1Q3SXM0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DCAF4L1Q3SXM0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.49
DCAF4L1Q3SXM0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
DCAF4L1Q3SXM0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 MIR939-201ENST00000401314 82 ntBASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DCAF4L1Q3SXM0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 LINC01529-204ENST00000636474 1715 ntBASIC24.37■■□□□ 1.49
DCAF4L1Q3SXM0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms