Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST3H3Q16695 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.91■□□□□ 0.78
HIST3H3Q16695 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HIST3H3Q16695 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST3H3Q16695 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HIST3H3Q16695 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.91■□□□□ 0.78
HIST3H3Q16695 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST3H3Q16695 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST3H3Q16695 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
HIST3H3Q16695 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
HIST3H3Q16695 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
HIST3H3Q16695 GUSBP5-201ENST00000418136 578 ntBASIC19.9■□□□□ 0.78
HIST3H3Q16695 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.9■□□□□ 0.78
HIST3H3Q16695 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.9■□□□□ 0.78
HIST3H3Q16695 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.9■□□□□ 0.78
HIST3H3Q16695 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIST3H3Q16695 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HIST3H3Q16695 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HIST3H3Q16695 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST3H3Q16695 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST3H3Q16695 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST3H3Q16695 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST3H3Q16695 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.89■□□□□ 0.77
HIST3H3Q16695 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.89■□□□□ 0.77
HIST3H3Q16695 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.89■□□□□ 0.77
HIST3H3Q16695 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.89■□□□□ 0.77
HIST3H3Q16695 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST3H3Q16695 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.88■□□□□ 0.77
HIST3H3Q16695 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIST3H3Q16695 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.88■□□□□ 0.77
HIST3H3Q16695 MIR6724-1-201ENST00000616420 92 ntBASIC19.88■□□□□ 0.77
HIST3H3Q16695 MIR6724-2-201ENST00000616483 92 ntBASIC19.88■□□□□ 0.77
HIST3H3Q16695 MIR6724-4-201ENST00000617390 92 ntBASIC19.88■□□□□ 0.77
HIST3H3Q16695 MIR6724-3-201ENST00000622482 92 ntBASIC19.88■□□□□ 0.77
HIST3H3Q16695 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST3H3Q16695 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HIST3H3Q16695 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST3H3Q16695 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST3H3Q16695 AC144652.1-201ENST00000609974 1624 ntBASIC19.87■□□□□ 0.77
HIST3H3Q16695 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HIST3H3Q16695 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIST3H3Q16695 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST3H3Q16695 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIST3H3Q16695 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.87■□□□□ 0.77
HIST3H3Q16695 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST3H3Q16695 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.87■□□□□ 0.77
HIST3H3Q16695 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HIST3H3Q16695 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST3H3Q16695 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.86■□□□□ 0.77
HIST3H3Q16695 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HIST3H3Q16695 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.86■□□□□ 0.77
HIST3H3Q16695 AC068473.5-201ENST00000616428 2072 ntBASIC19.86■□□□□ 0.77
HIST3H3Q16695 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIST3H3Q16695 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.86■□□□□ 0.77
HIST3H3Q16695 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIST3H3Q16695 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HIST3H3Q16695 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIST3H3Q16695 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HIST3H3Q16695 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIST3H3Q16695 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIST3H3Q16695 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.85■□□□□ 0.77
HIST3H3Q16695 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.85■□□□□ 0.77
HIST3H3Q16695 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
HIST3H3Q16695 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIST3H3Q16695 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
HIST3H3Q16695 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.84■□□□□ 0.77
HIST3H3Q16695 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST3H3Q16695 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIST3H3Q16695 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST3H3Q16695 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST3H3Q16695 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.84■□□□□ 0.77
HIST3H3Q16695 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST3H3Q16695 KRT16P3-201ENST00000439127 1283 ntBASIC19.84■□□□□ 0.77
HIST3H3Q16695 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST3H3Q16695 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.84■□□□□ 0.77
HIST3H3Q16695 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST3H3Q16695 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.84■□□□□ 0.77
HIST3H3Q16695 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST3H3Q16695 AL353803.4-201ENST00000565882 1934 ntBASIC19.84■□□□□ 0.77
HIST3H3Q16695 AC009102.2-201ENST00000606772 1639 ntBASIC19.84■□□□□ 0.77
HIST3H3Q16695 FP325331.1-202ENST00000623531 1380 ntBASIC19.83■□□□□ 0.77
HIST3H3Q16695 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HIST3H3Q16695 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIST3H3Q16695 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIST3H3Q16695 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HIST3H3Q16695 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIST3H3Q16695 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIST3H3Q16695 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HIST3H3Q16695 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.83■□□□□ 0.76
HIST3H3Q16695 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HIST3H3Q16695 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms