Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PER3P56645 RASA4CP-201ENST00000424092 1398 ntBASIC20.64■□□□□ 0.89
PER3P56645 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PER3P56645 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PER3P56645 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PER3P56645 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PER3P56645 AL162430.1-201ENST00000480705 870 ntBASIC20.64■□□□□ 0.89
PER3P56645 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PER3P56645 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PER3P56645 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PER3P56645 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.63■□□□□ 0.89
PER3P56645 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.63■□□□□ 0.89
PER3P56645 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
PER3P56645 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 AC027682.1-201ENST00000562846 899 ntBASIC20.63■□□□□ 0.89
PER3P56645 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PER3P56645 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PER3P56645 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PER3P56645 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PER3P56645 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PER3P56645 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PER3P56645 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PER3P56645 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.62■□□□□ 0.89
PER3P56645 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PER3P56645 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PER3P56645 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.62■□□□□ 0.89
PER3P56645 CA15P2-201ENST00000611168 834 ntBASIC20.62■□□□□ 0.89
PER3P56645 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PER3P56645 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER3P56645 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.61■□□□□ 0.89
PER3P56645 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PER3P56645 MIR4767-201ENST00000582827 78 ntBASIC20.61■□□□□ 0.89
PER3P56645 AC087623.3-201ENST00000607047 1098 ntBASIC20.61■□□□□ 0.89
PER3P56645 SLC6A10P-202ENST00000431994 2058 ntBASIC20.61■□□□□ 0.89
PER3P56645 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.61■□□□□ 0.89
PER3P56645 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.61■□□□□ 0.89
PER3P56645 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER3P56645 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.61■□□□□ 0.89
PER3P56645 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
PER3P56645 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.6■□□□□ 0.89
PER3P56645 AL139125.2-201ENST00000623134 1869 ntBASIC20.6■□□□□ 0.89
PER3P56645 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PER3P56645 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PER3P56645 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.6■□□□□ 0.89
PER3P56645 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER3P56645 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PER3P56645 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER3P56645 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.6■□□□□ 0.89
PER3P56645 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER3P56645 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.59■□□□□ 0.89
PER3P56645 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.59■□□□□ 0.89
PER3P56645 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER3P56645 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PER3P56645 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
PER3P56645 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PER3P56645 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PER3P56645 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PER3P56645 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.58■□□□□ 0.89
PER3P56645 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PER3P56645 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PER3P56645 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PER3P56645 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.58■□□□□ 0.88
PER3P56645 AC142381.3-201ENST00000568208 1670 ntBASIC20.58■□□□□ 0.88
PER3P56645 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.57■□□□□ 0.88
PER3P56645 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.57■□□□□ 0.88
PER3P56645 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 IRS3P-201ENST00000223076 1006 ntBASIC20.57■□□□□ 0.88
PER3P56645 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.57■□□□□ 0.88
PER3P56645 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PER3P56645 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PER3P56645 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PER3P56645 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
PER3P56645 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PER3P56645 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PER3P56645 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PER3P56645 AL138724.1-201ENST00000606771 1088 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms