Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH11P55287 C1orf229-201ENST00000623686 2258 ntBASIC20.51■□□□□ 0.87
CDH11P55287 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH11P55287 EP400NL-214ENST00000641289 2402 ntBASIC20.51■□□□□ 0.87
CDH11P55287 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDH11P55287 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH11P55287 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH11P55287 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH11P55287 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH11P55287 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH11P55287 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH11P55287 Z92544.1-202ENST00000571933 1220 ntBASIC20.5■□□□□ 0.87
CDH11P55287 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.5■□□□□ 0.87
CDH11P55287 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH11P55287 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH11P55287 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDH11P55287 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH11P55287 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH11P55287 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH11P55287 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH11P55287 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH11P55287 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH11P55287 KRT125P-201ENST00000546827 989 ntBASIC20.49■□□□□ 0.87
CDH11P55287 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDH11P55287 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH11P55287 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH11P55287 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDH11P55287 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH11P55287 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDH11P55287 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH11P55287 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH11P55287 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH11P55287 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH11P55287 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH11P55287 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDH11P55287 KRT18P24-201ENST00000344739 1156 ntBASIC20.48■□□□□ 0.87
CDH11P55287 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH11P55287 BX664725.1-201ENST00000438252 379 ntBASIC20.48■□□□□ 0.87
CDH11P55287 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CDH11P55287 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH11P55287 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH11P55287 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH11P55287 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDH11P55287 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CDH11P55287 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDH11P55287 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH11P55287 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH11P55287 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH11P55287 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH11P55287 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH11P55287 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH11P55287 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
CDH11P55287 AL592295.1-201ENST00000400984 884 ntBASIC20.47■□□□□ 0.87
CDH11P55287 AC120024.1-201ENST00000562672 995 ntBASIC20.47■□□□□ 0.87
CDH11P55287 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH11P55287 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CDH11P55287 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH11P55287 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH11P55287 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH11P55287 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH11P55287 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH11P55287 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDH11P55287 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH11P55287 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CDH11P55287 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH11P55287 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDH11P55287 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDH11P55287 AC131212.1-201ENST00000613771 668 ntBASIC20.46■□□□□ 0.87
CDH11P55287 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH11P55287 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH11P55287 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH11P55287 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH11P55287 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CDH11P55287 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
CDH11P55287 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH11P55287 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CDH11P55287 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH11P55287 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH11P55287 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDH11P55287 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH11P55287 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH11P55287 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH11P55287 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH11P55287 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH11P55287 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH11P55287 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH11P55287 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH11P55287 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH11P55287 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH11P55287 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH11P55287 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDH11P55287 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH11P55287 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CDH11P55287 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
CDH11P55287 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.44■□□□□ 0.86
CDH11P55287 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH11P55287 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
CDH11P55287 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH11P55287 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH11P55287 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms