Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1P51610 KRT18P14-201ENST00000534205 1250 ntBASIC19.76■□□□□ 0.75
HCFC1P51610 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.76■□□□□ 0.75
HCFC1P51610 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1P51610 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1P51610 YBX1P1-201ENST00000445822 960 ntBASIC19.75■□□□□ 0.75
HCFC1P51610 AL137784.2-201ENST00000607332 1000 ntBASIC19.75■□□□□ 0.75
HCFC1P51610 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1P51610 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HCFC1P51610 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1P51610 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1P51610 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1P51610 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.75■□□□□ 0.75
HCFC1P51610 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1P51610 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1P51610 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1P51610 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HCFC1P51610 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HCFC1P51610 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1P51610 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.74■□□□□ 0.75
HCFC1P51610 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1P51610 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.74■□□□□ 0.75
HCFC1P51610 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1P51610 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HCFC1P51610 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HCFC1P51610 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HCFC1P51610 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HCFC1P51610 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.73■□□□□ 0.75
HCFC1P51610 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.73■□□□□ 0.75
HCFC1P51610 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 IGHV3-19-201ENST00000521488 291 ntBASIC19.73■□□□□ 0.75
HCFC1P51610 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1P51610 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.72■□□□□ 0.75
HCFC1P51610 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
HCFC1P51610 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HCFC1P51610 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCFC1P51610 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HCFC1P51610 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HCFC1P51610 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.71■□□□□ 0.75
HCFC1P51610 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.71■□□□□ 0.75
HCFC1P51610 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HCFC1P51610 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HCFC1P51610 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.71■□□□□ 0.75
HCFC1P51610 pRNA.6-201ENST00000610482 90 ntBASIC19.71■□□□□ 0.75
HCFC1P51610 pRNA.5-201ENST00000612139 90 ntBASIC19.71■□□□□ 0.75
HCFC1P51610 pRNA.11-201ENST00000618423 90 ntBASIC19.71■□□□□ 0.75
HCFC1P51610 pRNA.13-201ENST00000619112 90 ntBASIC19.71■□□□□ 0.75
HCFC1P51610 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HCFC1P51610 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HCFC1P51610 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HCFC1P51610 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.7■□□□□ 0.74
HCFC1P51610 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.7■□□□□ 0.74
HCFC1P51610 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HCFC1P51610 AC010525.1-201ENST00000585559 441 ntBASIC19.7■□□□□ 0.74
HCFC1P51610 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HCFC1P51610 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HCFC1P51610 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCFC1P51610 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.7■□□□□ 0.74
HCFC1P51610 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.7■□□□□ 0.74
HCFC1P51610 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HCFC1P51610 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.69■□□□□ 0.74
HCFC1P51610 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.69■□□□□ 0.74
HCFC1P51610 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.69■□□□□ 0.74
HCFC1P51610 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.69■□□□□ 0.74
HCFC1P51610 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1P51610 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.69■□□□□ 0.74
HCFC1P51610 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1P51610 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1P51610 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.69■□□□□ 0.74
HCFC1P51610 CCDC92B-201ENST00000575506 885 ntBASIC19.69■□□□□ 0.74
HCFC1P51610 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1P51610 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1P51610 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1P51610 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCFC1P51610 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1P51610 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1P51610 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.68■□□□□ 0.74
HCFC1P51610 AL354811.1-201ENST00000610286 706 ntBASIC19.68■□□□□ 0.74
HCFC1P51610 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HCFC1P51610 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HCFC1P51610 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms