Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.71■□□□□ 0.43
CDC34P49427 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC34P49427 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC34P49427 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC34P49427 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC34P49427 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC34P49427 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDC34P49427 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC34P49427 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC34P49427 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC34P49427 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC34P49427 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC34P49427 AC060814.1-201ENST00000554326 538 ntBASIC17.71■□□□□ 0.43
CDC34P49427 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.71■□□□□ 0.43
CDC34P49427 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDC34P49427 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC34P49427 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC34P49427 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.71■□□□□ 0.43
CDC34P49427 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC34P49427 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.71■□□□□ 0.43
CDC34P49427 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDC34P49427 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDC34P49427 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CDC34P49427 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDC34P49427 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 AC093536.1-201ENST00000569153 554 ntBASIC17.7■□□□□ 0.42
CDC34P49427 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CDC34P49427 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.7■□□□□ 0.42
CDC34P49427 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC34P49427 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC34P49427 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDC34P49427 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.69■□□□□ 0.42
CDC34P49427 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.69■□□□□ 0.42
CDC34P49427 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC34P49427 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.69■□□□□ 0.42
CDC34P49427 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC34P49427 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC34P49427 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CDC34P49427 AL137060.1-201ENST00000618151 2648 ntBASIC17.69■□□□□ 0.42
CDC34P49427 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC34P49427 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.69■□□□□ 0.42
CDC34P49427 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDC34P49427 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDC34P49427 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CDC34P49427 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDC34P49427 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.68■□□□□ 0.42
CDC34P49427 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC34P49427 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CDC34P49427 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC34P49427 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC34P49427 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC34P49427 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC34P49427 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC34P49427 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC34P49427 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC34P49427 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC34P49427 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC34P49427 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC34P49427 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC34P49427 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC34P49427 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC34P49427 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDC34P49427 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC34P49427 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC34P49427 ZNRF2P2-203ENST00000454624 420 ntBASIC17.66■□□□□ 0.42
CDC34P49427 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CDC34P49427 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC34P49427 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDC34P49427 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC34P49427 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC34P49427 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDC34P49427 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC34P49427 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDC34P49427 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC34P49427 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC34P49427 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC34P49427 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC34P49427 AC090877.2-201ENST00000558441 1738 ntBASIC17.65■□□□□ 0.42
CDC34P49427 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC34P49427 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC34P49427 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC34P49427 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDC34P49427 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms