Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 DCD1YHR144C 939 nt4.92□□□□□ -1.62
UPF3P48412 NIT2YJL126W 924 nt4.92□□□□□ -1.62
UPF3P48412 KTI12YKL110C 942 nt4.92□□□□□ -1.62
UPF3P48412 SPC3YLR066W 555 nt4.92□□□□□ -1.62
UPF3P48412 snR10snR10 245 nt4.92□□□□□ -1.62
UPF3P48412 POS5YPL188W 1245 nt4.92□□□□□ -1.62
UPF3P48412 YPL191CYPL191C 1083 nt4.92□□□□□ -1.62
UPF3P48412 BBP1YPL255W 1158 nt4.92□□□□□ -1.62
UPF3P48412 ADE4YMR300C 1533 nt4.92□□□□□ -1.62
UPF3P48412 FBP26YJL155C 1359 nt4.91□□□□□ -1.62
UPF3P48412 STR2YJR130C 1920 nt4.91□□□□□ -1.62
UPF3P48412 MHF2YDL160C-A 243 nt4.91□□□□□ -1.62
UPF3P48412 AAD4YDL243C 990 nt4.91□□□□□ -1.62
UPF3P48412 RRP45YDR280W 918 nt4.91□□□□□ -1.62
UPF3P48412 SAY1YGR263C 1275 nt4.91□□□□□ -1.62
UPF3P48412 YND1YER005W 1893 nt4.91□□□□□ -1.62
UPF3P48412 BRE2YLR015W 1518 nt4.91□□□□□ -1.62
UPF3P48412 ABD1YBR236C 1311 nt4.91□□□□□ -1.62
UPF3P48412 SBE2YDR351W 2595 nt4.91□□□□□ -1.62
UPF3P48412 TGL4YKR089C 2733 nt4.9□□□□□ -1.62
UPF3P48412 KEX1YGL203C 2190 nt4.9□□□□□ -1.62
UPF3P48412 YIL089WYIL089W 618 nt4.9□□□□□ -1.63
UPF3P48412 OPY2YPR075C 1083 nt4.9□□□□□ -1.63
UPF3P48412 MRI1YPR118W 1236 nt4.9□□□□□ -1.63
UPF3P48412 BLM10YFL007W 6432 nt4.9□□□□□ -1.63
UPF3P48412 ENT1YDL161W 1365 nt4.9□□□□□ -1.63
UPF3P48412 BOI2YER114C 3123 nt4.9□□□□□ -1.63
UPF3P48412 THI21YPL258C 1656 nt4.89□□□□□ -1.63
UPF3P48412 BUD7YOR299W 2241 nt4.89□□□□□ -1.63
UPF3P48412 DIN7YDR263C 1293 nt4.89□□□□□ -1.63
UPF3P48412 YER067C-AYER067C-A 324 nt4.89□□□□□ -1.63
UPF3P48412 SCS2YER120W 735 nt4.89□□□□□ -1.63
UPF3P48412 YFL064CYFL064C 525 nt4.89□□□□□ -1.63
UPF3P48412 YGL193CYGL193C 312 nt4.89□□□□□ -1.63
UPF3P48412 ELO3YLR372W 1038 nt4.89□□□□□ -1.63
UPF3P48412 YPR202WYPR202W 717 nt4.89□□□□□ -1.63
UPF3P48412 RSC6YCR052W 1452 nt4.88□□□□□ -1.63
UPF3P48412 SSA2YLL024C 1920 nt4.88□□□□□ -1.63
UPF3P48412 YAP1YML007W 1953 nt4.88□□□□□ -1.63
UPF3P48412 HXT14YNL318C 1623 nt4.88□□□□□ -1.63
UPF3P48412 MHR1YDR296W 681 nt4.88□□□□□ -1.63
UPF3P48412 MRP13YGR084C 1020 nt4.88□□□□□ -1.63
UPF3P48412 SFH5YJL145W 885 nt4.88□□□□□ -1.63
UPF3P48412 SCW10YMR305C 1170 nt4.88□□□□□ -1.63
UPF3P48412 YCL041CYCL041C 495 nt4.88□□□□□ -1.63
UPF3P48412 MIH1YMR036C 1665 nt4.88□□□□□ -1.63
UPF3P48412 PAN1YIR006C 4443 nt4.88□□□□□ -1.63
UPF3P48412 SWC3YAL011W 1878 nt4.88□□□□□ -1.63
UPF3P48412 MMT1YMR177W 1533 nt4.87□□□□□ -1.63
UPF3P48412 KIN28YDL108W 921 nt4.87□□□□□ -1.63
UPF3P48412 YDR134CYDR134C 411 nt4.87□□□□□ -1.63
UPF3P48412 PRO3YER023W 861 nt4.87□□□□□ -1.63
UPF3P48412 YNR061CYNR061C 660 nt4.87□□□□□ -1.63
UPF3P48412 FUI1YBL042C 1920 nt4.86□□□□□ -1.63
UPF3P48412 LPP1YDR503C 825 nt4.86□□□□□ -1.63
UPF3P48412 PRM10YJL108C 1152 nt4.86□□□□□ -1.63
UPF3P48412 YOL024WYOL024W 519 nt4.86□□□□□ -1.63
UPF3P48412 MET31YPL038W 534 nt4.86□□□□□ -1.63
UPF3P48412 GRE1YPL223C 507 nt4.86□□□□□ -1.63
UPF3P48412 APJ1YNL077W 1587 nt4.86□□□□□ -1.63
UPF3P48412 STV1YMR054W 2673 nt4.86□□□□□ -1.63
UPF3P48412 RKM3YBR030W 1659 nt4.86□□□□□ -1.63
UPF3P48412 SEH1YGL100W 1050 nt4.85□□□□□ -1.63
UPF3P48412 YGL199CYGL199C 471 nt4.85□□□□□ -1.63
UPF3P48412 PFA4YOL003C 1137 nt4.85□□□□□ -1.63
UPF3P48412 SET6YPL165C 1122 nt4.85□□□□□ -1.63
UPF3P48412 QCR2YPR191W 1107 nt4.85□□□□□ -1.63
UPF3P48412 MMT2YPL224C 1455 nt4.85□□□□□ -1.63
UPF3P48412 STE7YDL159W 1548 nt4.85□□□□□ -1.63
UPF3P48412 GLN4YOR168W 2430 nt4.84□□□□□ -1.63
UPF3P48412 SAC1YKL212W 1872 nt4.84□□□□□ -1.63
UPF3P48412 ALG11YNL048W 1647 nt4.84□□□□□ -1.63
UPF3P48412 PAL1YDR348C 1500 nt4.84□□□□□ -1.63
UPF3P48412 STP4YDL048C 1473 nt4.84□□□□□ -1.63
UPF3P48412 TRS23YDR246W 660 nt4.84□□□□□ -1.63
UPF3P48412 YDR274CYDR274C 372 nt4.84□□□□□ -1.63
UPF3P48412 NSE3YDR288W 912 nt4.84□□□□□ -1.63
UPF3P48412 YIR018C-AYIR018C-A 138 nt4.84□□□□□ -1.63
UPF3P48412 RPB4YJL140W 666 nt4.84□□□□□ -1.63
UPF3P48412 BLS1YLR408C 369 nt4.84□□□□□ -1.63
UPF3P48412 YLR462WYLR462W 609 nt4.84□□□□□ -1.63
UPF3P48412 HLJ1YMR161W 675 nt4.84□□□□□ -1.63
UPF3P48412 PCA1YBR295W 3651 nt4.84□□□□□ -1.63
UPF3P48412 ROT2YBR229C 2865 nt4.84□□□□□ -1.63
UPF3P48412 PRD1YCL057W 2139 nt4.84□□□□□ -1.64
UPF3P48412 SPO1YNL012W 1896 nt4.83□□□□□ -1.64
UPF3P48412 CPS1YJL172W 1731 nt4.83□□□□□ -1.64
UPF3P48412 MTC1YJL123C 1437 nt4.83□□□□□ -1.64
UPF3P48412 FMP30YPL103C 1407 nt4.83□□□□□ -1.64
UPF3P48412 PRO2YOR323C 1371 nt4.83□□□□□ -1.64
UPF3P48412 TYR1YBR166C 1359 nt4.83□□□□□ -1.64
UPF3P48412 SEM1YDR363W-A 270 nt4.83□□□□□ -1.64
UPF3P48412 YER187WYER187W 426 nt4.83□□□□□ -1.64
UPF3P48412 NAT2YGR147C 867 nt4.83□□□□□ -1.64
UPF3P48412 YHL045WYHL045W 348 nt4.83□□□□□ -1.64
UPF3P48412 FUN19YAL034C 1242 nt4.83□□□□□ -1.64
UPF3P48412 YLR049CYLR049C 1287 nt4.83□□□□□ -1.64
UPF3P48412 HFA1YMR207C 6372 nt4.83□□□□□ -1.64
UPF3P48412 ATG8YBL078C 354 nt4.83□□□□□ -1.64
UPF3P48412 YBR126W-AYBR126W-A 207 nt4.83□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms