Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.041e-7■■■■□ 26.5
MATR3P43243 GNB1-202ENST00000434686 684 ntTSL 310.88□□□□□ -0.671e-7■■■■□ 26.5
MATR3P43243 GNB1-204ENST00000439272 602 ntTSL 510.48□□□□□ -0.731e-7■■■■□ 26.5
MATR3P43243 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.576e-7■■■■□ 26.4
MATR3P43243 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.586e-7■■■■□ 26.4
MATR3P43243 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.766e-7■■■■□ 26.4
MATR3P43243 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.46e-7■■■■□ 26.4
MATR3P43243 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.23e-6■■■■□ 26.4
MATR3P43243 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.153e-6■■■■□ 26.4
MATR3P43243 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.153e-6■■■■□ 26.4
MATR3P43243 SUSD1-201ENST00000355396 2861 ntAPPRIS ALT2 TSL 212.58□□□□□ -0.43e-6■■■■□ 26.4
MATR3P43243 MAP3K4-210ENST00000540205 589 ntTSL 415□□□□□ -0.013e-7■■■■□ 26.4
MATR3P43243 MAP3K4-212ENST00000542851 625 ntTSL 213.55□□□□□ -0.243e-7■■■■□ 26.4
MATR3P43243 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.034e-13■■■■□ 26.4
MATR3P43243 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.47■■□□□ 1.994e-13■■■■□ 26.4
MATR3P43243 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.7■■□□□ 1.384e-13■■■■□ 26.4
MATR3P43243 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.684e-13■■■■□ 26.4
MATR3P43243 GSR-203ENST00000523295 913 ntTSL 314.98□□□□□ -0.014e-13■■■■□ 26.4
MATR3P43243 GSR-202ENST00000521479 582 ntTSL 310.95□□□□□ -0.664e-13■■■■□ 26.4
MATR3P43243 DROSHA-215ENST00000512076 1124 ntTSL 1 (best)9.3□□□□□ -0.927e-7■■■■□ 26.4
MATR3P43243 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.61■■□□□ 1.211e-6■■■■□ 26.4
MATR3P43243 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.361e-6■■■■□ 26.4
MATR3P43243 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.181e-6■■■■□ 26.4
MATR3P43243 ZNF800-202ENST00000393312 2375 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.31e-6■■■■□ 26.4
MATR3P43243 ZNF800-204ENST00000434602 955 ntTSL 511.77□□□□□ -0.531e-6■■■■□ 26.4
MATR3P43243 ZNF800-206ENST00000439506 410 ntTSL 1 (best)5.76□□□□□ -1.491e-6■■■■□ 26.4
MATR3P43243 ZNF800-205ENST00000436992 502 ntTSL 21.77□□□□□ -2.131e-6■■■■□ 26.4
MATR3P43243 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.34■□□□□ 0.532e-6■■■■□ 26.3
MATR3P43243 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.01■□□□□ 0.472e-6■■■■□ 26.3
MATR3P43243 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.27■□□□□ 0.362e-6■■■■□ 26.3
MATR3P43243 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.63■□□□□ 0.252e-6■■■■□ 26.3
MATR3P43243 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.6■□□□□ 0.092e-6■■■■□ 26.3
MATR3P43243 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC13.71□□□□□ -0.212e-6■■■■□ 26.3
MATR3P43243 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC13.46□□□□□ -0.252e-6■■■■□ 26.3
MATR3P43243 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.842e-6■■■■□ 26.3
MATR3P43243 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.745e-8■■■■□ 26.3
MATR3P43243 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.878e-7■■■■□ 26.3
MATR3P43243 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.045e-8■■■■□ 26.3
MATR3P43243 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.195e-8■■■■□ 26.3
MATR3P43243 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.48□□□□□ -1.212e-6■■■■□ 26.3
MATR3P43243 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.258e-7■■■■□ 26.3
MATR3P43243 UCK2-204ENST00000464197 811 ntTSL 47.17□□□□□ -1.262e-6■■■■□ 26.3
MATR3P43243 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.91□□□□□ -1.32e-6■■■■□ 26.3
MATR3P43243 UCK2-203ENST00000463772 599 ntTSL 56.84□□□□□ -1.312e-6■■■■□ 26.3
MATR3P43243 UCK2-202ENST00000462329 830 ntTSL 1 (best)6.3□□□□□ -1.42e-6■■■■□ 26.3
MATR3P43243 URI1-204ENST00000570704 559 ntTSL 42.81□□□□□ -1.965e-7■■■■□ 26.3
MATR3P43243 URI1-212ENST00000576442 578 ntTSL 42.68□□□□□ -1.985e-7■■■■□ 26.3
MATR3P43243 AC069277.1-204ENST00000342990 246 ntTSL 38.27□□□□□ -1.094e-7■■■■□ 26.3
MATR3P43243 EVA1A-209ENST00000486489 524 ntTSL 221.35■■□□□ 1.016e-8■■■■□ 26.3
MATR3P43243 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.316e-7■■■■□ 26.3
MATR3P43243 ERMP1-203ENST00000462592 3554 ntTSL 218.93■□□□□ 0.623e-6■■■■□ 26.2
MATR3P43243 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.21■□□□□ 0.837e-7■■■■□ 26.2
MATR3P43243 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.29■□□□□ 0.687e-7■■■■□ 26.2
MATR3P43243 BANP-209ENST00000439677 736 ntTSL 518.42■□□□□ 0.547e-7■■■■□ 26.2
MATR3P43243 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.31■□□□□ 0.527e-7■■■■□ 26.2
MATR3P43243 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.23■□□□□ 0.517e-7■■■■□ 26.2
MATR3P43243 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.99■□□□□ 0.477e-7■■■■□ 26.2
MATR3P43243 BANP-219ENST00000485772 608 ntTSL 514.14□□□□□ -0.157e-7■■■■□ 26.2
MATR3P43243 BANP-206ENST00000423252 644 ntTSL 513.3□□□□□ -0.287e-7■■■■□ 26.2
MATR3P43243 BANP-220ENST00000488074 759 ntTSL 313.3□□□□□ -0.287e-7■■■■□ 26.2
MATR3P43243 BANP-222ENST00000526460 547 ntTSL 411.98□□□□□ -0.497e-7■■■■□ 26.2
MATR3P43243 BANP-212ENST00000459966 627 ntTSL 29.9□□□□□ -0.827e-7■■■■□ 26.2
MATR3P43243 BANP-210ENST00000454563 558 ntTSL 49.04□□□□□ -0.967e-7■■■■□ 26.2
MATR3P43243 BANP-213ENST00000466197 640 ntTSL 58.56□□□□□ -1.047e-7■■■■□ 26.2
MATR3P43243 BANP-225ENST00000569400 802 ntTSL 48.22□□□□□ -1.097e-7■■■■□ 26.2
MATR3P43243 BANP-205ENST00000412691 586 ntTSL 48.22□□□□□ -1.097e-7■■■■□ 26.2
MATR3P43243 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.821e-7■■■■□ 26.2
MATR3P43243 TCERG1-207ENST00000507175 1984 ntTSL 219.85■□□□□ 0.771e-7■■■■□ 26.2
MATR3P43243 ORC5-202ENST00000422497 2043 ntTSL 217.3■□□□□ 0.361e-7■■■■□ 26.2
MATR3P43243 POLE-209ENST00000536445 2334 ntTSL 315.38■□□□□ 0.051e-7■■■■□ 26.2
MATR3P43243 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.071e-7■■■■□ 26.2
MATR3P43243 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.151e-7■■■■□ 26.2
MATR3P43243 POLE-210ENST00000537064 8011 ntTSL 1 (best)12.07□□□□□ -0.481e-7■■■■□ 26.2
MATR3P43243 TCERG1-210ENST00000510724 583 ntTSL 39.23□□□□□ -0.931e-7■■■■□ 26.2
MATR3P43243 ORC5-206ENST00000477223 780 ntTSL 24.84□□□□□ -1.631e-7■■■■□ 26.2
MATR3P43243 TCERG1-212ENST00000513298 711 ntTSL 33.42□□□□□ -1.861e-7■■■■□ 26.2
MATR3P43243 NBAS-204ENST00000427792 442 ntTSL 23.47□□□□□ -1.855e-7■■■■□ 26.2
MATR3P43243 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC14.24□□□□□ -0.134e-7■■■■□ 26.2
MATR3P43243 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.57■■■□□ 28e-7■■■■□ 26.2
MATR3P43243 TBC1D5-223ENST00000471679 435 ntTSL 425.54■■□□□ 1.681e-6■■■■□ 26.2
MATR3P43243 EIF4G1-226ENST00000450424 2658 ntTSL 520.25■□□□□ 0.836e-7■■■■□ 26.2
MATR3P43243 RUNX1-208ENST00000455571 610 ntTSL 320.05■□□□□ 0.86e-7■■■■□ 26.2
MATR3P43243 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.51■□□□□ 0.556e-7■■■■□ 26.2
MATR3P43243 EIF4G1-208ENST00000413967 2808 ntTSL 218.35■□□□□ 0.536e-7■■■■□ 26.2
MATR3P43243 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.516e-7■■■■□ 26.2
MATR3P43243 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.56e-7■■■■□ 26.2
MATR3P43243 EIF4G1-210ENST00000421110 2755 ntTSL 518.16■□□□□ 0.56e-7■■■■□ 26.2
MATR3P43243 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.99■□□□□ 0.476e-7■■■■□ 26.2
MATR3P43243 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.98■□□□□ 0.478e-7■■■■□ 26.2
MATR3P43243 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.88■□□□□ 0.456e-7■■■■□ 26.2
MATR3P43243 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.82■□□□□ 0.446e-7■■■■□ 26.2
MATR3P43243 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.8■□□□□ 0.446e-7■■■■□ 26.2
MATR3P43243 EIF4G1-213ENST00000426123 2907 ntTSL 217.34■□□□□ 0.376e-7■■■■□ 26.2
MATR3P43243 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.14■□□□□ 0.336e-7■■■■□ 26.2
MATR3P43243 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.328e-7■■■■□ 26.2
MATR3P43243 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.276e-7■■■■□ 26.2
MATR3P43243 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)16.17■□□□□ 0.186e-7■■■■□ 26.2
MATR3P43243 AC006511.5-201ENST00000639368 1209 ntTSL 515.81■□□□□ 0.126e-7■■■■□ 26.2
MATR3P43243 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC15.52■□□□□ 0.086e-7■■■■□ 26.2
MATR3P43243 AP3S2-213ENST00000560771 740 ntTSL 315.04■□□□□ -06e-7■■■■□ 26.2
Retrieved 100 of 16,209 protein–RNA pairs in 77.8 ms