Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 HSF1YGL073W 2502 nt6.28□□□□□ -1.4
MSH4P40965 ACT1YFL039C 1128 nt6.28□□□□□ -1.4
MSH4P40965 PEX14YGL153W 1026 nt6.28□□□□□ -1.4
MSH4P40965 PGA2YNL149C 390 nt6.28□□□□□ -1.4
MSH4P40965 ASH1YKL185W 1767 nt6.28□□□□□ -1.4
MSH4P40965 EXO1YOR033C 2109 nt6.28□□□□□ -1.4
MSH4P40965 SIS2YKR072C 1689 nt6.27□□□□□ -1.41
MSH4P40965 PAD1YDR538W 729 nt6.27□□□□□ -1.41
MSH4P40965 TIM21YGR033C 720 nt6.27□□□□□ -1.41
MSH4P40965 YJL156W-AYJL156W-A 222 nt6.27□□□□□ -1.41
MSH4P40965 SMD3YLR147C 306 nt6.27□□□□□ -1.41
MSH4P40965 ROX3YBL093C 663 nt6.27□□□□□ -1.41
MSH4P40965 YPR142CYPR142C 564 nt6.27□□□□□ -1.41
MSH4P40965 VHS2YIL135C 1311 nt6.26□□□□□ -1.41
MSH4P40965 SRO9YCL037C 1305 nt6.26□□□□□ -1.41
MSH4P40965 VMA13YPR036W 1437 nt6.26□□□□□ -1.41
MSH4P40965 MUP3YHL036W 1641 nt6.26□□□□□ -1.41
MSH4P40965 PHO8YDR481C 1701 nt6.26□□□□□ -1.41
MSH4P40965 MTQ2YDR140W 666 nt6.26□□□□□ -1.41
MSH4P40965 SFC1YJR095W 969 nt6.26□□□□□ -1.41
MSH4P40965 YLR156WYLR156W 345 nt6.26□□□□□ -1.41
MSH4P40965 YLR157W-DYLR157W-D 213 nt6.26□□□□□ -1.41
MSH4P40965 YLR159WYLR159W 345 nt6.26□□□□□ -1.41
MSH4P40965 YLR161WYLR161W 345 nt6.26□□□□□ -1.41
MSH4P40965 REH1YLR387C 1299 nt6.26□□□□□ -1.41
MSH4P40965 FYV6YNL133C 522 nt6.26□□□□□ -1.41
MSH4P40965 RAS1YOR101W 930 nt6.26□□□□□ -1.41
MSH4P40965 JID1YPR061C 906 nt6.26□□□□□ -1.41
MSH4P40965 YPR071WYPR071W 636 nt6.26□□□□□ -1.41
MSH4P40965 snR37snR37 386 nt6.26□□□□□ -1.41
MSH4P40965 IFM1YOL023W 2031 nt6.26□□□□□ -1.41
MSH4P40965 CYK3YDL117W 2658 nt6.26□□□□□ -1.41
MSH4P40965 GPM2YDL021W 936 nt6.25□□□□□ -1.41
MSH4P40965 RAV2YDR202C 1056 nt6.25□□□□□ -1.41
MSH4P40965 YAP6YDR259C 1152 nt6.25□□□□□ -1.41
MSH4P40965 BI2Q0110 1272 nt6.25□□□□□ -1.41
MSH4P40965 DSD1YGL196W 1287 nt6.25□□□□□ -1.41
MSH4P40965 DAN1YJR150C 897 nt6.25□□□□□ -1.41
MSH4P40965 YLR222C-AYLR222C-A 231 nt6.25□□□□□ -1.41
MSH4P40965 SPC2YML055W 537 nt6.25□□□□□ -1.41
MSH4P40965 LTO1YNL260C 597 nt6.25□□□□□ -1.41
MSH4P40965 YPL062WYPL062W 405 nt6.25□□□□□ -1.41
MSH4P40965 YPR195CYPR195C 330 nt6.25□□□□□ -1.41
MSH4P40965 ASF2YDL197C 1578 nt6.25□□□□□ -1.41
MSH4P40965 PCI8YIL071C 1335 nt6.25□□□□□ -1.41
MSH4P40965 GAS2YLR343W 1668 nt6.24□□□□□ -1.41
MSH4P40965 CUP1-1YHR053C 186 nt6.24□□□□□ -1.41
MSH4P40965 CUP1-2YHR055C 186 nt6.24□□□□□ -1.41
MSH4P40965 SEC72YLR292C 582 nt6.24□□□□□ -1.41
MSH4P40965 YLR317WYLR317W 435 nt6.24□□□□□ -1.41
MSH4P40965 NRM1YNR009W 750 nt6.24□□□□□ -1.41
MSH4P40965 YHR045WYHR045W 1683 nt6.23□□□□□ -1.41
MSH4P40965 RAD7YJR052W 1698 nt6.23□□□□□ -1.41
MSH4P40965 TIP20YGL145W 2106 nt6.23□□□□□ -1.41
MSH4P40965 ALG1YBR110W 1350 nt6.23□□□□□ -1.41
MSH4P40965 RNH202YDR279W 1053 nt6.23□□□□□ -1.41
MSH4P40965 KEG1YFR042W 603 nt6.23□□□□□ -1.41
MSH4P40965 YGL214WYGL214W 486 nt6.23□□□□□ -1.41
MSH4P40965 DBP8YHR169W 1296 nt6.23□□□□□ -1.41
MSH4P40965 MRT4YKL009W 711 nt6.23□□□□□ -1.41
MSH4P40965 PRS1YKL181W 1284 nt6.23□□□□□ -1.41
MSH4P40965 USB1YLR132C 873 nt6.23□□□□□ -1.41
MSH4P40965 YNL019CYNL019C 855 nt6.23□□□□□ -1.41
MSH4P40965 YNL033WYNL033W 855 nt6.23□□□□□ -1.41
MSH4P40965 TEX1YNL253W 1269 nt6.23□□□□□ -1.41
MSH4P40965 MDY2YOL111C 639 nt6.23□□□□□ -1.41
MSH4P40965 YPR015CYPR015C 744 nt6.23□□□□□ -1.41
MSH4P40965 ATP20YPR020W 348 nt6.23□□□□□ -1.41
MSH4P40965 RFA1YAR007C 1866 nt6.23□□□□□ -1.41
MSH4P40965 ABZ1YNR033W 2364 nt6.23□□□□□ -1.41
MSH4P40965 UTP7YER082C 1665 nt6.23□□□□□ -1.41
MSH4P40965 DPH2YKL191W 1605 nt6.22□□□□□ -1.41
MSH4P40965 YDR008CYDR008C 351 nt6.22□□□□□ -1.41
MSH4P40965 BMH1YER177W 804 nt6.22□□□□□ -1.41
MSH4P40965 YFR034W-AYFR034W-A 288 nt6.22□□□□□ -1.41
MSH4P40965 SIP2YGL208W 1248 nt6.22□□□□□ -1.41
MSH4P40965 POM33YLL023C 840 nt6.22□□□□□ -1.41
MSH4P40965 YIM2YMR151W 438 nt6.22□□□□□ -1.41
MSH4P40965 YNR042WYNR042W 429 nt6.22□□□□□ -1.41
MSH4P40965 ECM33YBR078W 1290 nt6.22□□□□□ -1.41
MSH4P40965 CSH1YBR161W 1131 nt6.22□□□□□ -1.41
MSH4P40965 CUS1YMR240C 1311 nt6.22□□□□□ -1.41
MSH4P40965 YHR137C-AYHR137C-A 651 nt6.21□□□□□ -1.42
MSH4P40965 YIL089WYIL089W 618 nt6.21□□□□□ -1.42
MSH4P40965 IST3YIR005W 447 nt6.21□□□□□ -1.42
MSH4P40965 MRPL49YJL096W 486 nt6.21□□□□□ -1.42
MSH4P40965 CBF1YJR060W 1056 nt6.21□□□□□ -1.42
MSH4P40965 CMC1YKL137W 336 nt6.21□□□□□ -1.42
MSH4P40965 YLR379WYLR379W 375 nt6.21□□□□□ -1.42
MSH4P40965 RHO2YNL090W 579 nt6.21□□□□□ -1.42
MSH4P40965 COX11YPL132W 903 nt6.21□□□□□ -1.42
MSH4P40965 SLI1YGR212W 1407 nt6.21□□□□□ -1.42
MSH4P40965 ACF2YLR144C 2340 nt6.21□□□□□ -1.42
MSH4P40965 FRE3YOR381W 2136 nt6.2□□□□□ -1.42
MSH4P40965 PRD1YCL057W 2139 nt6.2□□□□□ -1.42
MSH4P40965 BAP2YBR068C 1830 nt6.2□□□□□ -1.42
MSH4P40965 RAD57YDR004W 1383 nt6.2□□□□□ -1.42
MSH4P40965 RAD53YPL153C 2466 nt6.2□□□□□ -1.42
MSH4P40965 GAS3YMR215W 1575 nt6.2□□□□□ -1.42
MSH4P40965 COQ6YGR255C 1440 nt6.2□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms