Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SAA4P35542 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SAA4P35542 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.22■□□□□ 0.51
SAA4P35542 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA4P35542 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SAA4P35542 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SAA4P35542 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SAA4P35542 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA4P35542 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.21■□□□□ 0.51
SAA4P35542 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.21■□□□□ 0.51
SAA4P35542 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.21■□□□□ 0.51
SAA4P35542 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA4P35542 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.21■□□□□ 0.51
SAA4P35542 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA4P35542 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SAA4P35542 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA4P35542 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA4P35542 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.2■□□□□ 0.5
SAA4P35542 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA4P35542 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.2■□□□□ 0.5
SAA4P35542 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.2■□□□□ 0.5
SAA4P35542 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.2■□□□□ 0.5
SAA4P35542 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.2■□□□□ 0.5
SAA4P35542 AL138724.1-201ENST00000606771 1088 ntBASIC18.2■□□□□ 0.5
SAA4P35542 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA4P35542 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA4P35542 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.2■□□□□ 0.5
SAA4P35542 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAA4P35542 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SAA4P35542 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAA4P35542 EDA-201ENST00000338901 1233 ntBASIC18.19■□□□□ 0.5
SAA4P35542 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAA4P35542 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SAA4P35542 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAA4P35542 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.19■□□□□ 0.5
SAA4P35542 MIR4767-201ENST00000582827 78 ntBASIC18.19■□□□□ 0.5
SAA4P35542 AC011298.3-201ENST00000615796 283 ntBASIC18.19■□□□□ 0.5
SAA4P35542 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAA4P35542 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.19■□□□□ 0.5
SAA4P35542 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA4P35542 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SAA4P35542 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA4P35542 AC142381.2-201ENST00000566120 298 ntBASIC18.18■□□□□ 0.5
SAA4P35542 MIR3181-201ENST00000578512 73 ntBASIC18.18■□□□□ 0.5
SAA4P35542 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA4P35542 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.18■□□□□ 0.5
SAA4P35542 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA4P35542 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA4P35542 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.18■□□□□ 0.5
SAA4P35542 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SAA4P35542 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA4P35542 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SAA4P35542 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA4P35542 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.17■□□□□ 0.5
SAA4P35542 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAA4P35542 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SAA4P35542 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAA4P35542 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SAA4P35542 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.17■□□□□ 0.5
SAA4P35542 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.17■□□□□ 0.5
SAA4P35542 AL355001.2-201ENST00000620617 1191 ntBASIC18.17■□□□□ 0.5
SAA4P35542 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.17■□□□□ 0.5
SAA4P35542 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAA4P35542 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SAA4P35542 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAA4P35542 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAA4P35542 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SAA4P35542 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAA4P35542 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.16■□□□□ 0.5
SAA4P35542 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAA4P35542 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAA4P35542 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.16■□□□□ 0.5
SAA4P35542 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAA4P35542 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
SAA4P35542 pRNA.6-201ENST00000610482 90 ntBASIC18.16■□□□□ 0.5
SAA4P35542 pRNA.5-201ENST00000612139 90 ntBASIC18.16■□□□□ 0.5
SAA4P35542 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.16■□□□□ 0.5
SAA4P35542 pRNA.11-201ENST00000618423 90 ntBASIC18.16■□□□□ 0.5
SAA4P35542 pRNA.13-201ENST00000619112 90 ntBASIC18.16■□□□□ 0.5
SAA4P35542 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.16■□□□□ 0.5
SAA4P35542 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAA4P35542 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.16■□□□□ 0.5
SAA4P35542 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SAA4P35542 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAA4P35542 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
SAA4P35542 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SAA4P35542 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.15■□□□□ 0.5
SAA4P35542 AL031432.3-201ENST00000607698 485 ntBASIC18.15■□□□□ 0.5
SAA4P35542 AC136469.2-201ENST00000623944 1028 ntBASIC18.15■□□□□ 0.5
SAA4P35542 AC144652.1-201ENST00000609974 1624 ntBASIC18.15■□□□□ 0.5
SAA4P35542 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SAA4P35542 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms