Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEPDP12955 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEPDP12955 AL161729.1-201ENST00000604104 1402 ntBASIC20.72■□□□□ 0.91
PEPDP12955 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEPDP12955 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEPDP12955 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.71■□□□□ 0.91
PEPDP12955 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PEPDP12955 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.71■□□□□ 0.91
PEPDP12955 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.71■□□□□ 0.91
PEPDP12955 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.71■□□□□ 0.91
PEPDP12955 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.71■□□□□ 0.91
PEPDP12955 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEPDP12955 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEPDP12955 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEPDP12955 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEPDP12955 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEPDP12955 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.7■□□□□ 0.9
PEPDP12955 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.7■□□□□ 0.9
PEPDP12955 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.7■□□□□ 0.9
PEPDP12955 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.7■□□□□ 0.9
PEPDP12955 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEPDP12955 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEPDP12955 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PEPDP12955 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.69■□□□□ 0.9
PEPDP12955 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.69■□□□□ 0.9
PEPDP12955 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEPDP12955 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEPDP12955 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.69■□□□□ 0.9
PEPDP12955 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEPDP12955 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.69■□□□□ 0.9
PEPDP12955 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEPDP12955 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.69■□□□□ 0.9
PEPDP12955 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.69■□□□□ 0.9
PEPDP12955 AL356740.2-201ENST00000601559 647 ntBASIC20.69■□□□□ 0.9
PEPDP12955 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.69■□□□□ 0.9
PEPDP12955 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.69■□□□□ 0.9
PEPDP12955 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEPDP12955 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PEPDP12955 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
PEPDP12955 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEPDP12955 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.68■□□□□ 0.9
PEPDP12955 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEPDP12955 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.68■□□□□ 0.9
PEPDP12955 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.68■□□□□ 0.9
PEPDP12955 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEPDP12955 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PEPDP12955 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEPDP12955 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PEPDP12955 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEPDP12955 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.67■□□□□ 0.9
PEPDP12955 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.67■□□□□ 0.9
PEPDP12955 AL117332.1-201ENST00000622628 974 ntBASIC20.67■□□□□ 0.9
PEPDP12955 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.67■□□□□ 0.9
PEPDP12955 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEPDP12955 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.66■□□□□ 0.9
PEPDP12955 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PEPDP12955 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.66■□□□□ 0.9
PEPDP12955 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PEPDP12955 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PEPDP12955 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PEPDP12955 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PEPDP12955 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PEPDP12955 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PEPDP12955 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEPDP12955 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEPDP12955 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.65■□□□□ 0.9
PEPDP12955 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEPDP12955 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.65■□□□□ 0.9
PEPDP12955 MIR3621-201ENST00000580529 85 ntBASIC20.65■□□□□ 0.9
PEPDP12955 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEPDP12955 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEPDP12955 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PEPDP12955 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PEPDP12955 CLDN5-201ENST00000403084 2357 ntBASIC20.64■□□□□ 0.89
PEPDP12955 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.64■□□□□ 0.89
PEPDP12955 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.64■□□□□ 0.89
PEPDP12955 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.64■□□□□ 0.89
PEPDP12955 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PEPDP12955 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PEPDP12955 AC005703.6-201ENST00000623265 1329 ntBASIC20.64■□□□□ 0.89
PEPDP12955 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.64■□□□□ 0.89
PEPDP12955 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.64■□□□□ 0.89
PEPDP12955 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.64■□□□□ 0.89
PEPDP12955 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PEPDP12955 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PEPDP12955 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PEPDP12955 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PEPDP12955 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PEPDP12955 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PEPDP12955 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PEPDP12955 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms