Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SP9P0CG40 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.58■■□□□ 1.21
SP9P0CG40 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.58■■□□□ 1.2
SP9P0CG40 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.57■■□□□ 1.2
SP9P0CG40 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SP9P0CG40 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SP9P0CG40 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.57■■□□□ 1.2
SP9P0CG40 CD99P1-205ENST00000527459 561 ntBASIC22.57■■□□□ 1.2
SP9P0CG40 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SP9P0CG40 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SP9P0CG40 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SP9P0CG40 AC133637.1-201ENST00000624115 1537 ntBASIC22.57■■□□□ 1.2
SP9P0CG40 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SP9P0CG40 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SP9P0CG40 NCF1B-203ENST00000435988 1254 ntBASIC22.56■■□□□ 1.2
SP9P0CG40 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.56■■□□□ 1.2
SP9P0CG40 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.56■■□□□ 1.2
SP9P0CG40 AC010525.1-201ENST00000585559 441 ntBASIC22.56■■□□□ 1.2
SP9P0CG40 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SP9P0CG40 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
SP9P0CG40 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
SP9P0CG40 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SP9P0CG40 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SP9P0CG40 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SP9P0CG40 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SP9P0CG40 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SP9P0CG40 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.55■■□□□ 1.2
SP9P0CG40 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SP9P0CG40 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.54■■□□□ 1.2
SP9P0CG40 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SP9P0CG40 AC105233.4-201ENST00000642045 216 ntBASIC22.54■■□□□ 1.2
SP9P0CG40 AC010501.1-201ENST00000606270 1962 ntBASIC22.54■■□□□ 1.2
SP9P0CG40 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SP9P0CG40 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SP9P0CG40 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SP9P0CG40 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SP9P0CG40 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SP9P0CG40 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.53■■□□□ 1.2
SP9P0CG40 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SP9P0CG40 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.53■■□□□ 1.2
SP9P0CG40 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.53■■□□□ 1.2
SP9P0CG40 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.53■■□□□ 1.2
SP9P0CG40 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.53■■□□□ 1.2
SP9P0CG40 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
SP9P0CG40 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SP9P0CG40 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SP9P0CG40 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SP9P0CG40 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.52■■□□□ 1.2
SP9P0CG40 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SP9P0CG40 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.52■■□□□ 1.2
SP9P0CG40 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SP9P0CG40 TSPY20P-201ENST00000450910 630 ntBASIC22.52■■□□□ 1.2
SP9P0CG40 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SP9P0CG40 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.51■■□□□ 1.19
SP9P0CG40 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SP9P0CG40 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.51■■□□□ 1.19
SP9P0CG40 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.51■■□□□ 1.19
SP9P0CG40 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.51■■□□□ 1.19
SP9P0CG40 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.51■■□□□ 1.19
SP9P0CG40 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SP9P0CG40 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SP9P0CG40 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.51■■□□□ 1.19
SP9P0CG40 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.51■■□□□ 1.19
SP9P0CG40 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.5■■□□□ 1.19
SP9P0CG40 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SP9P0CG40 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SP9P0CG40 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.5■■□□□ 1.19
SP9P0CG40 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SP9P0CG40 OR2I1P-207ENST00000453522 948 ntBASIC22.5■■□□□ 1.19
SP9P0CG40 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.5■■□□□ 1.19
SP9P0CG40 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.5■■□□□ 1.19
SP9P0CG40 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SP9P0CG40 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SP9P0CG40 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.49■■□□□ 1.19
SP9P0CG40 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.49■■□□□ 1.19
SP9P0CG40 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
SP9P0CG40 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SP9P0CG40 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SP9P0CG40 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SP9P0CG40 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SP9P0CG40 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.49■■□□□ 1.19
SP9P0CG40 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SP9P0CG40 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SP9P0CG40 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.49■■□□□ 1.19
SP9P0CG40 AL499627.2-201ENST00000606283 725 ntBASIC22.49■■□□□ 1.19
SP9P0CG40 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.49■■□□□ 1.19
SP9P0CG40 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SP9P0CG40 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.49■■□□□ 1.19
SP9P0CG40 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.49■■□□□ 1.19
SP9P0CG40 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.48■■□□□ 1.19
SP9P0CG40 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SP9P0CG40 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms