Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNYL3P0C7X3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNYL3P0C7X3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNYL3P0C7X3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCNYL3P0C7X3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNYL3P0C7X3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNYL3P0C7X3 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.59■■□□□ 1.05
CCNYL3P0C7X3 AC141586.4-201ENST00000624558 1573 ntBASIC21.59■■□□□ 1.05
CCNYL3P0C7X3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNYL3P0C7X3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCNYL3P0C7X3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCNYL3P0C7X3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.58■■□□□ 1.05
CCNYL3P0C7X3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNYL3P0C7X3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNYL3P0C7X3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNYL3P0C7X3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNYL3P0C7X3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNYL3P0C7X3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.57■■□□□ 1.04
CCNYL3P0C7X3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCNYL3P0C7X3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNYL3P0C7X3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCNYL3P0C7X3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.57■■□□□ 1.04
CCNYL3P0C7X3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 AC099791.2-201ENST00000605725 427 ntBASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCNYL3P0C7X3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 AL136967.2-201ENST00000623968 743 ntBASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 AC009102.2-201ENST00000606772 1639 ntBASIC21.55■■□□□ 1.04
CCNYL3P0C7X3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 AF213884.3-201ENST00000563833 479 ntBASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 AL161729.1-201ENST00000604104 1402 ntBASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCNYL3P0C7X3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 AL138724.1-201ENST00000606771 1088 ntBASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 AC241377.3-202ENST00000626088 1088 ntBASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 AC241585.3-202ENST00000628937 1088 ntBASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 AC245100.8-202ENST00000629247 1058 ntBASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNYL3P0C7X3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 SERBP1P1-201ENST00000396021 1160 ntBASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 AC133561.1-201ENST00000568600 2415 ntBASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNYL3P0C7X3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCNYL3P0C7X3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 MIR939-201ENST00000401314 82 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms