Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LTAP01374 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LTAP01374 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LTAP01374 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.96■□□□□ 0.31
LTAP01374 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.96■□□□□ 0.31
LTAP01374 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LTAP01374 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LTAP01374 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.96■□□□□ 0.31
LTAP01374 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LTAP01374 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LTAP01374 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LTAP01374 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LTAP01374 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LTAP01374 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.95■□□□□ 0.3
LTAP01374 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.95■□□□□ 0.3
LTAP01374 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
LTAP01374 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LTAP01374 AL592295.1-201ENST00000400984 884 ntBASIC16.95■□□□□ 0.3
LTAP01374 ABHD17AP4-201ENST00000411545 909 ntBASIC16.95■□□□□ 0.3
LTAP01374 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LTAP01374 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LTAP01374 C11orf96-202ENST00000528572 1834 ntBASIC16.95■□□□□ 0.3
LTAP01374 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LTAP01374 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LTAP01374 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.95■□□□□ 0.3
LTAP01374 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.95■□□□□ 0.3
LTAP01374 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LTAP01374 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LTAP01374 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LTAP01374 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LTAP01374 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LTAP01374 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.94■□□□□ 0.3
LTAP01374 AC092053.2-201ENST00000640557 1818 ntBASIC16.94■□□□□ 0.3
LTAP01374 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LTAP01374 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LTAP01374 RPS2P7-201ENST00000447334 885 ntBASIC16.94■□□□□ 0.3
LTAP01374 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.94■□□□□ 0.3
LTAP01374 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LTAP01374 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LTAP01374 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LTAP01374 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 AC139530.1-201ENST00000575312 1977 ntBASIC16.93■□□□□ 0.3
LTAP01374 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LTAP01374 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 AL137060.1-201ENST00000618151 2648 ntBASIC16.93■□□□□ 0.3
LTAP01374 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.93■□□□□ 0.3
LTAP01374 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.93■□□□□ 0.3
LTAP01374 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LTAP01374 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.93■□□□□ 0.3
LTAP01374 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LTAP01374 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LTAP01374 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LTAP01374 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LTAP01374 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.92■□□□□ 0.3
LTAP01374 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.92■□□□□ 0.3
LTAP01374 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.92■□□□□ 0.3
LTAP01374 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.92■□□□□ 0.3
LTAP01374 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LTAP01374 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LTAP01374 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
LTAP01374 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LTAP01374 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LTAP01374 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LTAP01374 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
LTAP01374 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.92■□□□□ 0.3
LTAP01374 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.91■□□□□ 0.3
LTAP01374 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LTAP01374 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LTAP01374 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.91■□□□□ 0.3
LTAP01374 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.91■□□□□ 0.3
LTAP01374 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.91■□□□□ 0.3
LTAP01374 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.91■□□□□ 0.3
LTAP01374 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LTAP01374 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LTAP01374 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.9■□□□□ 0.3
LTAP01374 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
LTAP01374 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms