Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PGK1P00558 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGK1P00558 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.29■■□□□ 1.64
PGK1P00558 AC012414.1-201ENST00000556676 535 ntBASIC25.29■■□□□ 1.64
PGK1P00558 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.29■■□□□ 1.64
PGK1P00558 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGK1P00558 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGK1P00558 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGK1P00558 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
PGK1P00558 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PGK1P00558 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PGK1P00558 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PGK1P00558 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.28■■□□□ 1.64
PGK1P00558 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.28■■□□□ 1.64
PGK1P00558 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.28■■□□□ 1.64
PGK1P00558 CCDC92B-201ENST00000575506 885 ntBASIC25.28■■□□□ 1.64
PGK1P00558 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PGK1P00558 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.28■■□□□ 1.64
PGK1P00558 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.27■■□□□ 1.64
PGK1P00558 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PGK1P00558 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.27■■□□□ 1.64
PGK1P00558 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.27■■□□□ 1.64
PGK1P00558 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.27■■□□□ 1.64
PGK1P00558 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.27■■□□□ 1.64
PGK1P00558 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGK1P00558 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGK1P00558 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
PGK1P00558 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGK1P00558 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.26■■□□□ 1.63
PGK1P00558 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.26■■□□□ 1.63
PGK1P00558 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.26■■□□□ 1.63
PGK1P00558 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.26■■□□□ 1.63
PGK1P00558 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGK1P00558 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.26■■□□□ 1.63
PGK1P00558 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGK1P00558 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.26■■□□□ 1.63
PGK1P00558 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGK1P00558 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGK1P00558 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PGK1P00558 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.25■■□□□ 1.63
PGK1P00558 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PGK1P00558 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.25■■□□□ 1.63
PGK1P00558 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PGK1P00558 AC091060.1-201ENST00000623524 1766 ntBASIC25.25■■□□□ 1.63
PGK1P00558 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.25■■□□□ 1.63
PGK1P00558 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.24■■□□□ 1.63
PGK1P00558 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
PGK1P00558 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.24■■□□□ 1.63
PGK1P00558 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.24■■□□□ 1.63
PGK1P00558 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PGK1P00558 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.24■■□□□ 1.63
PGK1P00558 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.24■■□□□ 1.63
PGK1P00558 AC133637.1-201ENST00000624115 1537 ntBASIC25.24■■□□□ 1.63
PGK1P00558 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PGK1P00558 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.24■■□□□ 1.63
PGK1P00558 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.24■■□□□ 1.63
PGK1P00558 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PGK1P00558 AL354811.1-201ENST00000610286 706 ntBASIC25.24■■□□□ 1.63
PGK1P00558 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.24■■□□□ 1.63
PGK1P00558 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PGK1P00558 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PGK1P00558 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.24■■□□□ 1.63
PGK1P00558 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGK1P00558 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGK1P00558 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGK1P00558 NTF6G-201ENST00000591094 616 ntBASIC25.23■■□□□ 1.63
PGK1P00558 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGK1P00558 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PGK1P00558 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.22■■□□□ 1.63
PGK1P00558 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PGK1P00558 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PGK1P00558 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.22■■□□□ 1.63
PGK1P00558 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.22■■□□□ 1.63
PGK1P00558 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.22■■□□□ 1.63
PGK1P00558 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.22■■□□□ 1.63
PGK1P00558 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.22■■□□□ 1.63
PGK1P00558 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PGK1P00558 AC010525.1-201ENST00000585559 441 ntBASIC25.22■■□□□ 1.63
PGK1P00558 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.22■■□□□ 1.63
PGK1P00558 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.22■■□□□ 1.63
PGK1P00558 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PGK1P00558 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PGK1P00558 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PGK1P00558 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.21■■□□□ 1.63
PGK1P00558 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PGK1P00558 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PGK1P00558 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
PGK1P00558 AC145676.1-201ENST00000514988 2004 ntBASIC25.2■■□□□ 1.63
PGK1P00558 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
PGK1P00558 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.2■■□□□ 1.62
PGK1P00558 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
PGK1P00558 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PGK1P00558 ID1-201ENST00000376105 1233 ntBASIC25.2■■□□□ 1.62
PGK1P00558 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PGK1P00558 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
PGK1P00558 KRT18P14-201ENST00000534205 1250 ntBASIC25.2■■□□□ 1.62
PGK1P00558 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
PGK1P00558 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.2■■□□□ 1.62
PGK1P00558 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
PGK1P00558 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms