Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCGB2A1O75556 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.68■□□□□ 0.42
SCGB2A1O75556 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.68■□□□□ 0.42
SCGB2A1O75556 YBX1P4-201ENST00000392794 808 ntBASIC17.68■□□□□ 0.42
SCGB2A1O75556 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.68■□□□□ 0.42
SCGB2A1O75556 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCGB2A1O75556 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.68■□□□□ 0.42
SCGB2A1O75556 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCGB2A1O75556 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCGB2A1O75556 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCGB2A1O75556 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB2A1O75556 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB2A1O75556 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.67■□□□□ 0.42
SCGB2A1O75556 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB2A1O75556 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.67■□□□□ 0.42
SCGB2A1O75556 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SCGB2A1O75556 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.67■□□□□ 0.42
SCGB2A1O75556 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.67■□□□□ 0.42
SCGB2A1O75556 MIR4281-201ENST00000580852 62 ntBASIC17.67■□□□□ 0.42
SCGB2A1O75556 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB2A1O75556 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SCGB2A1O75556 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB2A1O75556 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB2A1O75556 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB2A1O75556 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB2A1O75556 AC131274.2-201ENST00000580697 1507 ntBASIC17.67■□□□□ 0.42
SCGB2A1O75556 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB2A1O75556 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.67■□□□□ 0.42
SCGB2A1O75556 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.66■□□□□ 0.42
SCGB2A1O75556 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.66■□□□□ 0.42
SCGB2A1O75556 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.66■□□□□ 0.42
SCGB2A1O75556 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SCGB2A1O75556 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.66■□□□□ 0.42
SCGB2A1O75556 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SCGB2A1O75556 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SCGB2A1O75556 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.66■□□□□ 0.42
SCGB2A1O75556 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB2A1O75556 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB2A1O75556 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SCGB2A1O75556 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB2A1O75556 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.65■□□□□ 0.42
SCGB2A1O75556 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
SCGB2A1O75556 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB2A1O75556 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB2A1O75556 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SCGB2A1O75556 AC092068.2-201ENST00000590491 1708 ntBASIC17.65■□□□□ 0.42
SCGB2A1O75556 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.65■□□□□ 0.42
SCGB2A1O75556 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SCGB2A1O75556 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB2A1O75556 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB2A1O75556 ANOS2P-203ENST00000472227 1816 ntBASIC17.65■□□□□ 0.42
SCGB2A1O75556 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SCGB2A1O75556 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB2A1O75556 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SCGB2A1O75556 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCGB2A1O75556 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.64■□□□□ 0.41
SCGB2A1O75556 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB2A1O75556 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB2A1O75556 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB2A1O75556 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB2A1O75556 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB2A1O75556 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.64■□□□□ 0.41
SCGB2A1O75556 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.64■□□□□ 0.41
SCGB2A1O75556 MIR4508-201ENST00000584178 70 ntBASIC17.64■□□□□ 0.41
SCGB2A1O75556 AC010980.1-201ENST00000587192 1142 ntBASIC17.64■□□□□ 0.41
SCGB2A1O75556 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.64■□□□□ 0.41
SCGB2A1O75556 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB2A1O75556 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SCGB2A1O75556 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB2A1O75556 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB2A1O75556 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB2A1O75556 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB2A1O75556 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCGB2A1O75556 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB2A1O75556 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms