Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.06■■□□□ 1.12
LRP4O75096 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
LRP4O75096 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.06■■□□□ 1.12
LRP4O75096 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
LRP4O75096 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.05■■□□□ 1.12
LRP4O75096 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRP4O75096 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.05■■□□□ 1.12
LRP4O75096 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.05■■□□□ 1.12
LRP4O75096 AC008764.7-201ENST00000593779 1081 ntBASIC22.05■■□□□ 1.12
LRP4O75096 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
LRP4O75096 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRP4O75096 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
LRP4O75096 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
LRP4O75096 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
LRP4O75096 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRP4O75096 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRP4O75096 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
LRP4O75096 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.05■■□□□ 1.12
LRP4O75096 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRP4O75096 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.04■■□□□ 1.12
LRP4O75096 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.04■■□□□ 1.12
LRP4O75096 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRP4O75096 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRP4O75096 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRP4O75096 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRP4O75096 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRP4O75096 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.04■■□□□ 1.12
LRP4O75096 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.04■■□□□ 1.12
LRP4O75096 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRP4O75096 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
LRP4O75096 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRP4O75096 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
LRP4O75096 LINC01124-201ENST00000409786 2117 ntBASIC22.03■■□□□ 1.12
LRP4O75096 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.03■■□□□ 1.12
LRP4O75096 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRP4O75096 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.03■■□□□ 1.12
LRP4O75096 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.03■■□□□ 1.12
LRP4O75096 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRP4O75096 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
LRP4O75096 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.02■■□□□ 1.12
LRP4O75096 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRP4O75096 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
LRP4O75096 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.02■■□□□ 1.12
LRP4O75096 BX842568.3-201ENST00000418104 571 ntBASIC22.02■■□□□ 1.12
LRP4O75096 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.02■■□□□ 1.12
LRP4O75096 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.02■■□□□ 1.12
LRP4O75096 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRP4O75096 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.02■■□□□ 1.12
LRP4O75096 AC079630.1-202ENST00000618127 1840 ntBASIC22.02■■□□□ 1.12
LRP4O75096 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LRP4O75096 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.02■■□□□ 1.11
LRP4O75096 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
LRP4O75096 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.02■■□□□ 1.11
LRP4O75096 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.01■■□□□ 1.11
LRP4O75096 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRP4O75096 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LRP4O75096 AC010525.1-201ENST00000585559 441 ntBASIC22.01■■□□□ 1.11
LRP4O75096 AC144652.1-201ENST00000609974 1624 ntBASIC22.01■■□□□ 1.11
LRP4O75096 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
LRP4O75096 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22■■□□□ 1.11
LRP4O75096 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22■■□□□ 1.11
LRP4O75096 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
LRP4O75096 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRP4O75096 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
LRP4O75096 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRP4O75096 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
LRP4O75096 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRP4O75096 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22■■□□□ 1.11
LRP4O75096 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRP4O75096 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22■■□□□ 1.11
LRP4O75096 pRNA.6-201ENST00000610482 90 ntBASIC22■■□□□ 1.11
LRP4O75096 pRNA.5-201ENST00000612139 90 ntBASIC22■■□□□ 1.11
LRP4O75096 pRNA.11-201ENST00000618423 90 ntBASIC22■■□□□ 1.11
LRP4O75096 pRNA.13-201ENST00000619112 90 ntBASIC22■■□□□ 1.11
LRP4O75096 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRP4O75096 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.99■■□□□ 1.11
LRP4O75096 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRP4O75096 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
LRP4O75096 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRP4O75096 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.99■■□□□ 1.11
LRP4O75096 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.99■■□□□ 1.11
LRP4O75096 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRP4O75096 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRP4O75096 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.99■■□□□ 1.11
LRP4O75096 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRP4O75096 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRP4O75096 AC233992.3-201ENST00000607491 485 ntBASIC21.99■■□□□ 1.11
LRP4O75096 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRP4O75096 AL139125.2-201ENST00000623134 1869 ntBASIC21.99■■□□□ 1.11
LRP4O75096 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRP4O75096 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRP4O75096 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.98■■□□□ 1.11
LRP4O75096 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRP4O75096 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRP4O75096 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRP4O75096 AL499627.2-201ENST00000606283 725 ntBASIC21.98■■□□□ 1.11
LRP4O75096 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.97■■□□□ 1.11
LRP4O75096 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.97■■□□□ 1.11
LRP4O75096 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRP4O75096 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms