Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SHOXO15266 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SHOXO15266 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHOXO15266 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SHOXO15266 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SHOXO15266 RNF126P1-201ENST00000567452 1320 ntBASIC19.09■□□□□ 0.65
SHOXO15266 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SHOXO15266 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHOXO15266 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHOXO15266 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SHOXO15266 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHOXO15266 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHOXO15266 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHOXO15266 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.09■□□□□ 0.65
SHOXO15266 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.09■□□□□ 0.65
SHOXO15266 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHOXO15266 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHOXO15266 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHOXO15266 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHOXO15266 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHOXO15266 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SHOXO15266 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.08■□□□□ 0.65
SHOXO15266 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
SHOXO15266 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SHOXO15266 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHOXO15266 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SHOXO15266 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHOXO15266 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.07■□□□□ 0.64
SHOXO15266 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHOXO15266 GUSBP5-202ENST00000510805 1989 ntBASIC19.07■□□□□ 0.64
SHOXO15266 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHOXO15266 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SHOXO15266 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHOXO15266 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SHOXO15266 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHOXO15266 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SHOXO15266 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHOXO15266 AC133552.2-201ENST00000619106 1032 ntBASIC19.06■□□□□ 0.64
SHOXO15266 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.06■□□□□ 0.64
SHOXO15266 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SHOXO15266 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHOXO15266 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHOXO15266 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHOXO15266 AC007952.6-201ENST00000573168 2673 ntBASIC19.06■□□□□ 0.64
SHOXO15266 AC003957.1-201ENST00000625108 2673 ntBASIC19.06■□□□□ 0.64
SHOXO15266 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHOXO15266 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHOXO15266 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHOXO15266 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHOXO15266 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHOXO15266 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHOXO15266 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHOXO15266 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHOXO15266 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SHOXO15266 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.04■□□□□ 0.64
SHOXO15266 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SHOXO15266 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 AC009831.1-201ENST00000580420 1582 ntBASIC19.04■□□□□ 0.64
SHOXO15266 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
SHOXO15266 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.04■□□□□ 0.64
SHOXO15266 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHOXO15266 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHOXO15266 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHOXO15266 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHOXO15266 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.03■□□□□ 0.64
SHOXO15266 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.03■□□□□ 0.64
SHOXO15266 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHOXO15266 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHOXO15266 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
SHOXO15266 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHOXO15266 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHOXO15266 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHOXO15266 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SHOXO15266 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHOXO15266 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHOXO15266 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHOXO15266 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SHOXO15266 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHOXO15266 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHOXO15266 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHOXO15266 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHOXO15266 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms