Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC1O00299 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLIC1O00299 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.2■□□□□ 0.98
CLIC1O00299 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC1O00299 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.2■□□□□ 0.98
CLIC1O00299 ATP5G2P3-201ENST00000429083 425 ntBASIC21.2■□□□□ 0.98
CLIC1O00299 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC1O00299 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.2■□□□□ 0.98
CLIC1O00299 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLIC1O00299 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC1O00299 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC1O00299 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.2■□□□□ 0.98
CLIC1O00299 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC1O00299 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC1O00299 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC1O00299 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.19■□□□□ 0.98
CLIC1O00299 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC1O00299 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.19■□□□□ 0.98
CLIC1O00299 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC1O00299 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC1O00299 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.19■□□□□ 0.98
CLIC1O00299 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC1O00299 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CLIC1O00299 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.19■□□□□ 0.98
CLIC1O00299 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.19■□□□□ 0.98
CLIC1O00299 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CLIC1O00299 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.19■□□□□ 0.98
CLIC1O00299 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC1O00299 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC1O00299 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC1O00299 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC1O00299 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.18■□□□□ 0.98
CLIC1O00299 AC004448.1-201ENST00000458332 883 ntBASIC21.18■□□□□ 0.98
CLIC1O00299 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CLIC1O00299 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CLIC1O00299 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.18■□□□□ 0.98
CLIC1O00299 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.18■□□□□ 0.98
CLIC1O00299 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLIC1O00299 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC1O00299 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.17■□□□□ 0.98
CLIC1O00299 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC1O00299 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.17■□□□□ 0.98
CLIC1O00299 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC1O00299 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC1O00299 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.17■□□□□ 0.98
CLIC1O00299 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC1O00299 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLIC1O00299 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC1O00299 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC1O00299 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC1O00299 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.16■□□□□ 0.98
CLIC1O00299 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC1O00299 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC1O00299 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLIC1O00299 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CLIC1O00299 LINC00526-201ENST00000581067 1875 ntBASIC21.15■□□□□ 0.98
CLIC1O00299 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC1O00299 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC1O00299 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.15■□□□□ 0.98
CLIC1O00299 AC010980.1-201ENST00000587192 1142 ntBASIC21.15■□□□□ 0.98
CLIC1O00299 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC1O00299 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC1O00299 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLIC1O00299 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLIC1O00299 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLIC1O00299 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLIC1O00299 LINC00565-201ENST00000562710 2331 ntBASIC21.14■□□□□ 0.97
CLIC1O00299 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.14■□□□□ 0.97
CLIC1O00299 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLIC1O00299 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.14■□□□□ 0.97
CLIC1O00299 ECEL1P1-201ENST00000373592 1742 ntBASIC21.13■□□□□ 0.97
CLIC1O00299 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CLIC1O00299 TSPY13P-201ENST00000338964 914 ntBASIC21.13■□□□□ 0.97
CLIC1O00299 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLIC1O00299 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLIC1O00299 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.12■□□□□ 0.97
CLIC1O00299 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CLIC1O00299 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLIC1O00299 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CLIC1O00299 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLIC1O00299 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLIC1O00299 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.12■□□□□ 0.97
CLIC1O00299 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CLIC1O00299 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.12■□□□□ 0.97
CLIC1O00299 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLIC1O00299 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLIC1O00299 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLIC1O00299 CLDN5-201ENST00000403084 2357 ntBASIC21.11■□□□□ 0.97
CLIC1O00299 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLIC1O00299 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.11■□□□□ 0.97
CLIC1O00299 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLIC1O00299 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
CLIC1O00299 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.11■□□□□ 0.97
CLIC1O00299 ESRRAP2-201ENST00000418437 1549 ntBASIC21.11■□□□□ 0.97
CLIC1O00299 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLIC1O00299 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLIC1O00299 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.11■□□□□ 0.97
CLIC1O00299 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.11■□□□□ 0.97
CLIC1O00299 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CLIC1O00299 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms