Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SPDYE4A6NLX3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.6
SPDYE4A6NLX3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE4A6NLX3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE4A6NLX3 ABCB10P4-201ENST00000566803 2184 ntBASIC25.01■■□□□ 1.59
SPDYE4A6NLX3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
SPDYE4A6NLX3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
SPDYE4A6NLX3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE4A6NLX3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SPDYE4A6NLX3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPDYE4A6NLX3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
SPDYE4A6NLX3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25■■□□□ 1.59
SPDYE4A6NLX3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25■■□□□ 1.59
SPDYE4A6NLX3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25■■□□□ 1.59
SPDYE4A6NLX3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25■■□□□ 1.59
SPDYE4A6NLX3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25■■□□□ 1.59
SPDYE4A6NLX3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25■■□□□ 1.59
SPDYE4A6NLX3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
SPDYE4A6NLX3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 MIR3621-201ENST00000580529 85 ntBASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 AC007375.3-201ENST00000600936 2314 ntBASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.99■■□□□ 1.59
SPDYE4A6NLX3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
SPDYE4A6NLX3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.97■■□□□ 1.59
SPDYE4A6NLX3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 AC096631.2-201ENST00000436136 790 ntBASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SPDYE4A6NLX3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SPDYE4A6NLX3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SPDYE4A6NLX3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SPDYE4A6NLX3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.95■■□□□ 1.58
SPDYE4A6NLX3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.95■■□□□ 1.58
SPDYE4A6NLX3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.95■■□□□ 1.58
SPDYE4A6NLX3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SPDYE4A6NLX3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SPDYE4A6NLX3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.94■■□□□ 1.58
SPDYE4A6NLX3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SPDYE4A6NLX3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SPDYE4A6NLX3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SPDYE4A6NLX3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
SPDYE4A6NLX3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SPDYE4A6NLX3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.92■■□□□ 1.58
SPDYE4A6NLX3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SPDYE4A6NLX3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SPDYE4A6NLX3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
SPDYE4A6NLX3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SPDYE4A6NLX3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SPDYE4A6NLX3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SPDYE4A6NLX3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.92■■□□□ 1.58
SPDYE4A6NLX3 AC110285.6-201ENST00000617652 491 ntBASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms