Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01546A6NGU7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01546A6NGU7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LINC01546A6NGU7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01546A6NGU7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01546A6NGU7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC01546A6NGU7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01546A6NGU7 AC090877.2-201ENST00000558441 1738 ntBASIC15.97■□□□□ 0.15
LINC01546A6NGU7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 AL162393.1-201ENST00000437852 946 ntBASIC15.96■□□□□ 0.15
LINC01546A6NGU7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01546A6NGU7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LINC01546A6NGU7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.96■□□□□ 0.14
LINC01546A6NGU7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC01546A6NGU7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
LINC01546A6NGU7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
LINC01546A6NGU7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 FAM99A-202ENST00000538190 1989 ntBASIC15.95■□□□□ 0.14
LINC01546A6NGU7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 DUX4L11-201ENST00000611504 1267 ntBASIC15.95■□□□□ 0.14
LINC01546A6NGU7 DUX4L12-201ENST00000614593 1267 ntBASIC15.95■□□□□ 0.14
LINC01546A6NGU7 DUX4L14-201ENST00000621227 1267 ntBASIC15.95■□□□□ 0.14
LINC01546A6NGU7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 SMPD5-203ENST00000639008 1464 ntBASIC15.95■□□□□ 0.14
LINC01546A6NGU7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC01546A6NGU7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 AC010542.4-201ENST00000563151 1910 ntBASIC15.94■□□□□ 0.14
LINC01546A6NGU7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 AL022069.1-201ENST00000568025 1636 ntBASIC15.94■□□□□ 0.14
LINC01546A6NGU7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.94■□□□□ 0.14
LINC01546A6NGU7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01546A6NGU7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
LINC01546A6NGU7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LINC01546A6NGU7 ALDH1A3-203ENST00000557963 1670 ntBASIC15.93■□□□□ 0.14
LINC01546A6NGU7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LINC01546A6NGU7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LINC01546A6NGU7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01546A6NGU7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01546A6NGU7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms