Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.94■■■□□ 2.54
SBNO1A3KN83 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SBNO1A3KN83 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
SBNO1A3KN83 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SBNO1A3KN83 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.94■■■□□ 2.54
SBNO1A3KN83 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SBNO1A3KN83 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.93■■■□□ 2.54
SBNO1A3KN83 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC30.93■■■□□ 2.54
SBNO1A3KN83 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.93■■■□□ 2.54
SBNO1A3KN83 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SBNO1A3KN83 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SBNO1A3KN83 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SBNO1A3KN83 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SBNO1A3KN83 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SBNO1A3KN83 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
SBNO1A3KN83 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC30.92■■■□□ 2.54
SBNO1A3KN83 GXYLT1P2-201ENST00000433312 1230 ntBASIC30.92■■■□□ 2.54
SBNO1A3KN83 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SBNO1A3KN83 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SBNO1A3KN83 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.92■■■□□ 2.54
SBNO1A3KN83 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.92■■■□□ 2.54
SBNO1A3KN83 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SBNO1A3KN83 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SBNO1A3KN83 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC30.92■■■□□ 2.54
SBNO1A3KN83 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
SBNO1A3KN83 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC30.91■■■□□ 2.54
SBNO1A3KN83 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SBNO1A3KN83 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.91■■■□□ 2.54
SBNO1A3KN83 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
SBNO1A3KN83 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SBNO1A3KN83 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC30.9■■■□□ 2.54
SBNO1A3KN83 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.9■■■□□ 2.54
SBNO1A3KN83 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
SBNO1A3KN83 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.9■■■□□ 2.54
SBNO1A3KN83 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SBNO1A3KN83 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.89■■■□□ 2.54
SBNO1A3KN83 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.89■■■□□ 2.54
SBNO1A3KN83 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
SBNO1A3KN83 LINC02228-203ENST00000641970 1355 ntBASIC30.89■■■□□ 2.53
SBNO1A3KN83 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.88■■■□□ 2.53
SBNO1A3KN83 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SBNO1A3KN83 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
SBNO1A3KN83 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SBNO1A3KN83 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC30.88■■■□□ 2.53
SBNO1A3KN83 HLA-L-209ENST00000420110 1011 ntBASIC30.88■■■□□ 2.53
SBNO1A3KN83 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC30.88■■■□□ 2.53
SBNO1A3KN83 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.88■■■□□ 2.53
SBNO1A3KN83 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SBNO1A3KN83 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC30.87■■■□□ 2.53
SBNO1A3KN83 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SBNO1A3KN83 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.87■■■□□ 2.53
SBNO1A3KN83 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.87■■■□□ 2.53
SBNO1A3KN83 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SBNO1A3KN83 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC30.87■■■□□ 2.53
SBNO1A3KN83 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SBNO1A3KN83 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SBNO1A3KN83 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SBNO1A3KN83 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SBNO1A3KN83 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SBNO1A3KN83 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.86■■■□□ 2.53
SBNO1A3KN83 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SBNO1A3KN83 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SBNO1A3KN83 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.85■■■□□ 2.53
SBNO1A3KN83 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
SBNO1A3KN83 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
SBNO1A3KN83 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.85■■■□□ 2.53
SBNO1A3KN83 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.85■■■□□ 2.53
SBNO1A3KN83 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.85■■■□□ 2.53
SBNO1A3KN83 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SBNO1A3KN83 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SBNO1A3KN83 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC30.84■■■□□ 2.53
SBNO1A3KN83 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SBNO1A3KN83 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
SBNO1A3KN83 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SBNO1A3KN83 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SBNO1A3KN83 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC30.83■■■□□ 2.53
SBNO1A3KN83 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
SBNO1A3KN83 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SBNO1A3KN83 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.83■■■□□ 2.53
SBNO1A3KN83 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SBNO1A3KN83 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SBNO1A3KN83 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
SBNO1A3KN83 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC30.83■■■□□ 2.53
SBNO1A3KN83 AC133637.1-201ENST00000624115 1537 ntBASIC30.82■■■□□ 2.53
SBNO1A3KN83 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
SBNO1A3KN83 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
SBNO1A3KN83 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
SBNO1A3KN83 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.82■■■□□ 2.52
SBNO1A3KN83 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SBNO1A3KN83 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
SBNO1A3KN83 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SBNO1A3KN83 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.82■■■□□ 2.52
SBNO1A3KN83 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SBNO1A3KN83 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.81■■■□□ 2.52
SBNO1A3KN83 OR2I1P-207ENST00000453522 948 ntBASIC30.81■■■□□ 2.52
SBNO1A3KN83 AL499627.2-201ENST00000606283 725 ntBASIC30.81■■■□□ 2.52
SBNO1A3KN83 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.81■■■□□ 2.52
SBNO1A3KN83 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
SBNO1A3KN83 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.81■■■□□ 2.52
SBNO1A3KN83 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms