Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 AC079630.1-202ENST00000618127 1840 ntBASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-1A0A0K0K1D8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 AC009831.1-201ENST00000580420 1582 ntBASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 AC011551.1-201ENST00000614101 683 ntBASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-1A0A0K0K1D8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRBV6-1A0A0K0K1D8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 AC018755.3-202ENST00000596210 929 ntBASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-1A0A0K0K1D8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV6-1A0A0K0K1D8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 MIR639-201ENST00000384974 98 ntBASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 AC133552.2-201ENST00000619106 1032 ntBASIC16.83■□□□□ 0.28
TRBV6-1A0A0K0K1D8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-1A0A0K0K1D8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms