Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.41■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.39■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
MSANTD3-TMEFF1A0A0A6YYJ0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC92B-201ENST00000575506 885 ntBASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 AC091060.1-201ENST00000623524 1766 ntBASIC22.39■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 AC133637.1-201ENST00000624115 1537 ntBASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 AL354811.1-201ENST00000610286 706 ntBASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.38■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 AC145676.1-201ENST00000514988 2004 ntBASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 NTF6G-201ENST00000591094 616 ntBASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.36■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.35■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 KRT18P14-201ENST00000534205 1250 ntBASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 AC010525.1-201ENST00000585559 441 ntBASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.34■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
MSANTD3-TMEFF1A0A0A6YYJ0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.33■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms