Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AC226150.1-201ENST00000544259 466 ntBASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AC124068.2-201ENST00000569473 1109 ntBASIC16.55■□□□□ 0.24
TRIM47Q96LD4 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AL672207.1-201ENST00000328462 1570 ntBASIC16.55■□□□□ 0.24
TRIM47Q96LD4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AP002353.1-201ENST00000528257 1599 ntBASIC16.55■□□□□ 0.24
TRIM47Q96LD4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AL590440.2-201ENST00000641973 1595 ntBASIC16.55■□□□□ 0.24
TRIM47Q96LD4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM47Q96LD4 AC025183.3-201ENST00000623526 1482 ntBASIC16.54■□□□□ 0.24
TRIM47Q96LD4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AC009093.10-201ENST00000641956 1442 ntBASIC16.54■□□□□ 0.24
TRIM47Q96LD4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 CTBP2P8-201ENST00000422584 1330 ntBASIC16.54■□□□□ 0.24
TRIM47Q96LD4 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AC093826.1-201ENST00000508655 993 ntBASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AC027139.1-201ENST00000565286 951 ntBASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AP005212.2-201ENST00000584979 510 ntBASIC16.54■□□□□ 0.24
TRIM47Q96LD4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM47Q96LD4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms