Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 POM121L8P-201ENST00000417732 1281 ntBASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 POM121L9P-203ENST00000441984 1285 ntBASIC12.34□□□□□ -0.43
CCDC107Q8WV48 GCOM2-201ENST00000509133 1104 ntBASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AC068587.3-201ENST00000526613 355 ntBASIC12.34□□□□□ -0.43
CCDC107Q8WV48 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AL355385.1-201ENST00000606123 409 ntBASIC12.34□□□□□ -0.43
CCDC107Q8WV48 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AC138466.3-201ENST00000619983 221 ntBASIC12.34□□□□□ -0.43
CCDC107Q8WV48 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 MARK2P9-201ENST00000430958 1727 ntBASIC12.34□□□□□ -0.43
CCDC107Q8WV48 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.33□□□□□ -0.43
CCDC107Q8WV48 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
CCDC107Q8WV48 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCDC107Q8WV48 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCDC107Q8WV48 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCDC107Q8WV48 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 AL355102.3-201ENST00000554299 1678 ntBASIC12.33□□□□□ -0.44
CCDC107Q8WV48 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 TPM3P8-201ENST00000330554 643 ntBASIC12.33□□□□□ -0.44
CCDC107Q8WV48 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 AP006294.1-201ENST00000415407 339 ntBASIC12.33□□□□□ -0.44
CCDC107Q8WV48 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 ACTG1P3-201ENST00000431775 1114 ntBASIC12.33□□□□□ -0.44
CCDC107Q8WV48 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 MESTP3-201ENST00000503460 968 ntBASIC12.33□□□□□ -0.44
CCDC107Q8WV48 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 MIR5189-201ENST00000577370 114 ntBASIC12.33□□□□□ -0.44
CCDC107Q8WV48 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms