Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 AC079316.1-201ENST00000548397 411 ntBASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 COX11-210ENST00000639671 696 ntBASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
DEPDC4Q8N2C3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AC114812.1-204ENST00000449669 728 ntBASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AC007551.1-201ENST00000457394 519 ntBASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AP001889.1-201ENST00000525414 633 ntBASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 CLUHP6-201ENST00000580789 941 ntBASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AC005252.2-201ENST00000624630 1141 ntBASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AL034417.3-201ENST00000641100 1043 ntBASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AL138725.1-201ENST00000407347 1314 ntBASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEPDC4Q8N2C3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.33□□□□□ -0.27
DEPDC4Q8N2C3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
DEPDC4Q8N2C3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
DEPDC4Q8N2C3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
DEPDC4Q8N2C3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DEPDC4Q8N2C3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
DEPDC4Q8N2C3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.33□□□□□ -0.27
DEPDC4Q8N2C3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEPDC4Q8N2C3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
DEPDC4Q8N2C3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEPDC4Q8N2C3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
DEPDC4Q8N2C3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEPDC4Q8N2C3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms