Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.97□□□□□ -0.17
CDKL1Q00532 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.97□□□□□ -0.17
CDKL1Q00532 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.97□□□□□ -0.17
CDKL1Q00532 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CDKL1Q00532 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 TUBB1P2-201ENST00000422712 1306 ntBASIC13.97□□□□□ -0.17
CDKL1Q00532 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.97□□□□□ -0.17
CDKL1Q00532 TUBB1P1-201ENST00000503144 1300 ntBASIC13.97□□□□□ -0.17
CDKL1Q00532 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDKL1Q00532 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.97□□□□□ -0.17
CDKL1Q00532 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.97□□□□□ -0.17
CDKL1Q00532 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.97□□□□□ -0.17
CDKL1Q00532 AC092580.1-201ENST00000433998 658 ntBASIC13.97□□□□□ -0.17
CDKL1Q00532 AL591846.1-201ENST00000451736 433 ntBASIC13.97□□□□□ -0.17
CDKL1Q00532 RNMTL1P1-201ENST00000454103 560 ntBASIC13.97□□□□□ -0.17
CDKL1Q00532 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.97□□□□□ -0.17
CDKL1Q00532 AL583810.1-201ENST00000553344 1045 ntBASIC13.97□□□□□ -0.17
CDKL1Q00532 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.97□□□□□ -0.17
CDKL1Q00532 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.97□□□□□ -0.17
CDKL1Q00532 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.97□□□□□ -0.17
CDKL1Q00532 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.97□□□□□ -0.17
CDKL1Q00532 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.97□□□□□ -0.17
CDKL1Q00532 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.97□□□□□ -0.17
CDKL1Q00532 AC004899.1-201ENST00000424687 1714 ntBASIC13.97□□□□□ -0.17
CDKL1Q00532 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDKL1Q00532 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDKL1Q00532 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDKL1Q00532 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDKL1Q00532 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDKL1Q00532 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CDKL1Q00532 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.97□□□□□ -0.17
CDKL1Q00532 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CDKL1Q00532 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKL1Q00532 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKL1Q00532 AL590824.1-201ENST00000403828 1349 ntBASIC13.96□□□□□ -0.17
CDKL1Q00532 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKL1Q00532 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.96□□□□□ -0.17
CDKL1Q00532 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.96□□□□□ -0.17
CDKL1Q00532 AC078875.1-201ENST00000431907 724 ntBASIC13.96□□□□□ -0.17
CDKL1Q00532 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKL1Q00532 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.96□□□□□ -0.17
CDKL1Q00532 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKL1Q00532 RN7SL163P-201ENST00000583100 276 ntBASIC13.96□□□□□ -0.17
CDKL1Q00532 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.96□□□□□ -0.17
CDKL1Q00532 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.96□□□□□ -0.17
CDKL1Q00532 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.96□□□□□ -0.17
CDKL1Q00532 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CDKL1Q00532 AC007663.3-201ENST00000609632 465 ntBASIC13.96□□□□□ -0.17
CDKL1Q00532 AC068587.8-201ENST00000641239 219 ntBASIC13.96□□□□□ -0.17
CDKL1Q00532 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKL1Q00532 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 460 ms