Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 AC108024.1-201ENST00000626286 1721 ntBASIC10.06□□□□□ -0.8
RPL39P62891 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 AL022323.5-201ENST00000624101 2059 ntBASIC10.06□□□□□ -0.8
RPL39P62891 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RPL39P62891 Z98257.2-202ENST00000641138 1548 ntBASIC10.06□□□□□ -0.8
RPL39P62891 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 OS9-203ENST00000389142 2457 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RPL39P62891 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
RPL39P62891 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 LINC00638-201ENST00000555578 2518 ntBASIC10.05□□□□□ -0.8
RPL39P62891 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 CES1P1-201ENST00000421606 1704 ntBASIC10.05□□□□□ -0.8
RPL39P62891 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 CALY-202ENST00000368555 783 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 RN7SKP175-201ENST00000408472 289 ntBASIC10.05□□□□□ -0.8
RPL39P62891 DNAJB3-202ENST00000449667 1266 ntBASIC10.05□□□□□ -0.8
RPL39P62891 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 AC004967.1-201ENST00000453589 447 ntBASIC10.05□□□□□ -0.8
RPL39P62891 CD81-207ENST00000481687 890 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 AC004890.2-204ENST00000481968 304 ntBASIC10.05□□□□□ -0.8
RPL39P62891 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.05□□□□□ -0.8
RPL39P62891 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC10.05□□□□□ -0.8
RPL39P62891 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.05□□□□□ -0.8
RPL39P62891 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC10.05□□□□□ -0.8
RPL39P62891 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 AC133539.2-201ENST00000604757 467 ntBASIC10.05□□□□□ -0.8
RPL39P62891 AC093028.1-201ENST00000622998 982 ntBASIC10.05□□□□□ -0.8
RPL39P62891 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 AC073862.5-201ENST00000624129 2027 ntBASIC10.05□□□□□ -0.8
RPL39P62891 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
RPL39P62891 AP000593.2-201ENST00000542775 1433 ntBASIC10.05□□□□□ -0.8
RPL39P62891 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 PI4KAP2-201ENST00000360806 2080 ntBASIC10.05□□□□□ -0.8
RPL39P62891 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms