Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.62□□□□□ -0.23
HLCSP50747 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HLCSP50747 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.62□□□□□ -0.23
HLCSP50747 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLCSP50747 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLCSP50747 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
HLCSP50747 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLCSP50747 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLCSP50747 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLCSP50747 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.61□□□□□ -0.23
HLCSP50747 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HLCSP50747 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HLCSP50747 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HLCSP50747 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HLCSP50747 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.61□□□□□ -0.23
HLCSP50747 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 DPM3-202ENST00000368399 517 ntBASIC13.61□□□□□ -0.23
HLCSP50747 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HLCSP50747 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
HLCSP50747 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HLCSP50747 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.61□□□□□ -0.23
HLCSP50747 PUDPP3-201ENST00000445368 636 ntBASIC13.61□□□□□ -0.23
HLCSP50747 AL035414.1-201ENST00000451327 857 ntBASIC13.61□□□□□ -0.23
HLCSP50747 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.61□□□□□ -0.23
HLCSP50747 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.61□□□□□ -0.23
HLCSP50747 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.61□□□□□ -0.23
HLCSP50747 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.61□□□□□ -0.23
HLCSP50747 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.61□□□□□ -0.23
HLCSP50747 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HLCSP50747 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.61□□□□□ -0.23
HLCSP50747 AC004923.1-202ENST00000642106 209 ntBASIC13.61□□□□□ -0.23
HLCSP50747 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HLCSP50747 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
HLCSP50747 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.61□□□□□ -0.23
HLCSP50747 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.61□□□□□ -0.23
HLCSP50747 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLCSP50747 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HLCSP50747 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HLCSP50747 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
HLCSP50747 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
HLCSP50747 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HLCSP50747 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.6□□□□□ -0.23
HLCSP50747 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
HLCSP50747 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.6□□□□□ -0.23
HLCSP50747 POM121L14P-201ENST00000406100 1558 ntBASIC13.6□□□□□ -0.23
HLCSP50747 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLCSP50747 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.6□□□□□ -0.23
HLCSP50747 AL008707.1-201ENST00000422498 534 ntBASIC13.6□□□□□ -0.23
HLCSP50747 AC004899.1-201ENST00000424687 1714 ntBASIC13.6□□□□□ -0.23
HLCSP50747 AC016700.1-201ENST00000429424 312 ntBASIC13.6□□□□□ -0.23
HLCSP50747 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.6□□□□□ -0.23
HLCSP50747 AC012441.2-201ENST00000444843 739 ntBASIC13.6□□□□□ -0.23
HLCSP50747 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.6□□□□□ -0.23
HLCSP50747 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.6□□□□□ -0.23
HLCSP50747 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HLCSP50747 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms