Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.61■□□□□ 0.41
COL15A1P39059 AC018846.1-201ENST00000568231 183 ntBASIC17.61■□□□□ 0.41
COL15A1P39059 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.61■□□□□ 0.41
COL15A1P39059 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.61■□□□□ 0.41
COL15A1P39059 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COL15A1P39059 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 DDC-204ENST00000426377 1700 ntTSL 3 BASIC17.61■□□□□ 0.41
COL15A1P39059 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.61■□□□□ 0.41
COL15A1P39059 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 TUBB4AP1-201ENST00000450755 1325 ntBASIC17.6■□□□□ 0.41
COL15A1P39059 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC17.6■□□□□ 0.41
COL15A1P39059 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 CDCA4P4-201ENST00000435216 680 ntBASIC17.6■□□□□ 0.41
COL15A1P39059 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL15A1P39059 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.6■□□□□ 0.41
COL15A1P39059 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC17.6■□□□□ 0.41
COL15A1P39059 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC17.6■□□□□ 0.41
COL15A1P39059 TBC1D3P6-201ENST00000505954 962 ntBASIC17.6■□□□□ 0.41
COL15A1P39059 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.6■□□□□ 0.41
COL15A1P39059 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC17.6■□□□□ 0.41
COL15A1P39059 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 AL590235.1-201ENST00000564650 861 ntBASIC17.6■□□□□ 0.41
COL15A1P39059 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.6■□□□□ 0.41
COL15A1P39059 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.6■□□□□ 0.41
COL15A1P39059 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC17.6■□□□□ 0.41
COL15A1P39059 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.6■□□□□ 0.41
COL15A1P39059 AC113385.2-201ENST00000614465 762 ntBASIC17.6■□□□□ 0.41
COL15A1P39059 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL15A1P39059 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 AC027601.5-201ENST00000624065 2482 ntBASIC17.6■□□□□ 0.41
COL15A1P39059 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
COL15A1P39059 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL15A1P39059 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
COL15A1P39059 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.59■□□□□ 0.41
COL15A1P39059 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.59■□□□□ 0.41
COL15A1P39059 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.59■□□□□ 0.41
COL15A1P39059 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL15A1P39059 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.59■□□□□ 0.41
COL15A1P39059 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COL15A1P39059 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COL15A1P39059 NHP2P1-201ENST00000335274 462 ntBASIC17.59■□□□□ 0.41
COL15A1P39059 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL15A1P39059 AC092810.2-201ENST00000431570 362 ntBASIC17.59■□□□□ 0.41
COL15A1P39059 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.59■□□□□ 0.41
COL15A1P39059 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COL15A1P39059 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.59■□□□□ 0.41
COL15A1P39059 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.59■□□□□ 0.41
COL15A1P39059 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.59■□□□□ 0.41
COL15A1P39059 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.59■□□□□ 0.41
COL15A1P39059 MIR4326-201ENST00000582203 59 ntBASIC17.59■□□□□ 0.41
COL15A1P39059 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC17.59■□□□□ 0.41
COL15A1P39059 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.59■□□□□ 0.41
COL15A1P39059 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.59■□□□□ 0.41
COL15A1P39059 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 AL136379.1-201ENST00000623471 2642 ntBASIC17.59■□□□□ 0.41
COL15A1P39059 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL15A1P39059 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL15A1P39059 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COL15A1P39059 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
COL15A1P39059 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
COL15A1P39059 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL15A1P39059 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms