Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CDH3P22223 MYADML-201ENST00000474610 2147 ntBASIC13.99□□□□□ -0.17
CDH3P22223 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDH3P22223 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CDH3P22223 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH3P22223 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH3P22223 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH3P22223 AC012618.1-201ENST00000461223 412 ntBASIC13.99□□□□□ -0.17
CDH3P22223 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH3P22223 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH3P22223 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH3P22223 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CDH3P22223 AC024681.1-201ENST00000521917 487 ntBASIC13.99□□□□□ -0.17
CDH3P22223 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH3P22223 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH3P22223 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 MIR3619-201ENST00000579667 83 ntBASIC13.99□□□□□ -0.17
CDH3P22223 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH3P22223 AL157813.1-201ENST00000612996 587 ntBASIC13.99□□□□□ -0.17
CDH3P22223 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.99□□□□□ -0.17
CDH3P22223 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CDH3P22223 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CDH3P22223 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CDH3P22223 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CDH3P22223 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH3P22223 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDH3P22223 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDH3P22223 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDH3P22223 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH3P22223 XBP1P1-201ENST00000436573 652 ntBASIC13.98□□□□□ -0.17
CDH3P22223 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH3P22223 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH3P22223 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.98□□□□□ -0.17
CDH3P22223 AL161670.2-201ENST00000557650 1227 ntBASIC13.98□□□□□ -0.17
CDH3P22223 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH3P22223 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH3P22223 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDH3P22223 AC091812.3-201ENST00000621362 345 ntBASIC13.98□□□□□ -0.17
CDH3P22223 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH3P22223 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDH3P22223 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH3P22223 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms