Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 AL157996.1-201ENST00000624684 2299 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 AC004945.1-201ENST00000416738 983 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.43□□□□□ -0.42
SFTPBP07988 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.43□□□□□ -0.42
SFTPBP07988 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 TMEM198B-204ENST00000484016 896 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.43□□□□□ -0.42
SFTPBP07988 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 AC023310.1-201ENST00000554836 735 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.43□□□□□ -0.42
SFTPBP07988 MIR6799-201ENST00000620297 69 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 AC008687.7-202ENST00000637404 953 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SFTPBP07988 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 AC073548.1-201ENST00000624088 1882 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SFTPBP07988 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SFTPBP07988 AL365181.3-201ENST00000605886 3222 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 AC111170.3-201ENST00000624282 2464 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 FAM86MP-201ENST00000340703 885 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 FAM8A4P-201ENST00000435433 1213 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.42□□□□□ -0.42
SFTPBP07988 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.42□□□□□ -0.42
SFTPBP07988 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.42□□□□□ -0.42
SFTPBP07988 MIR4683-201ENST00000579659 81 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 RN7SL219P-201ENST00000582872 296 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.42□□□□□ -0.42
SFTPBP07988 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.42□□□□□ -0.42
SFTPBP07988 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.42□□□□□ -0.42
SFTPBP07988 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 AC006453.4-201ENST00000636949 1252 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 AC002472.3-201ENST00000640124 621 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
SFTPBP07988 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SFTPBP07988 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SFTPBP07988 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms