Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 BANF1P3-201ENST00000412556 261 ntBASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 GOLGA2P8-201ENST00000505201 779 ntBASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 IGLV3-15-201ENST00000518356 244 ntBASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 NPM1P43-201ENST00000558669 786 ntBASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 AC020922.3-201ENST00000595064 547 ntBASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 COX6A1P2-201ENST00000620597 330 ntBASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 AL928654.5-201ENST00000624831 2501 ntBASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAI2Q9Y5P3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.33□□□□□ -0.11
RAI2Q9Y5P3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAI2Q9Y5P3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.33□□□□□ -0.11
RAI2Q9Y5P3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAI2Q9Y5P3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAI2Q9Y5P3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAI2Q9Y5P3 AGAP10P-201ENST00000454844 2418 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AL359881.3-201ENST00000602640 1721 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AL627389.1-201ENST00000413508 1182 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AL353637.1-201ENST00000451571 732 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 CHCHD2P2-201ENST00000503744 321 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AC008723.1-201ENST00000506922 207 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AC116345.2-201ENST00000512837 523 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 PHBP15-201ENST00000574228 665 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 MIR4754-201ENST00000582477 89 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 CICP4-201ENST00000447359 2812 ntBASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAI2Q9Y5P3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 AC067931.2-201ENST00000623655 2003 ntBASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms