Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AP003171.2-201ENST00000528208 925 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AL512310.5-201ENST00000551999 515 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 MIR4683-201ENST00000579659 81 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AC005498.2-205ENST00000593218 784 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AC132938.4-201ENST00000623835 848 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AL033527.5-201ENST00000641382 801 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AC115284.2-201ENST00000624646 2054 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 REXO1L6P-201ENST00000603433 1515 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AC025183.3-201ENST00000623526 1482 ntBASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AL031719.1-201ENST00000623365 2587 ntBASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AC008494.3-201ENST00000606615 944 ntBASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AC004233.3-201ENST00000607794 1269 ntBASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 AC106028.4-201ENST00000614509 607 ntBASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 TMBIM7P-202ENST00000641474 1516 ntBASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2D4Q9Y2X8 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms