Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AL807761.2-201ENST00000422849 729 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 LDHBP1-201ENST00000455730 1119 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AC114947.1-202ENST00000514136 344 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 SIGLEC18P-201ENST00000602271 909 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AC007326.1-201ENST00000604539 458 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AC021016.3-201ENST00000608367 477 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AC018635.2-201ENST00000608625 364 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AL022334.2-201ENST00000610000 484 ntBASIC14.18□□□□□ -0.14
SPASTQ9UBP0 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPASTQ9UBP0 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 AL137784.3-201ENST00000623858 2288 ntBASIC14.17□□□□□ -0.14
SPASTQ9UBP0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 KRT8P31-201ENST00000504812 1408 ntBASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 MIR557-201ENST00000385239 98 ntBASIC14.17□□□□□ -0.14
SPASTQ9UBP0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 RPS9P1-201ENST00000419943 583 ntBASIC14.17□□□□□ -0.14
SPASTQ9UBP0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 AC078991.1-201ENST00000437297 610 ntBASIC14.17□□□□□ -0.14
SPASTQ9UBP0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 AC140658.4-201ENST00000561990 352 ntBASIC14.17□□□□□ -0.14
SPASTQ9UBP0 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 AC005632.3-201ENST00000605544 308 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms