Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 KRT223P-202ENST00000449164 1292 ntBASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 KLF2P4-201ENST00000451959 1225 ntBASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AC073413.1-201ENST00000603927 732 ntBASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AC244669.2-201ENST00000612320 853 ntBASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 MIR6775-201ENST00000617557 69 ntBASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AC060814.4-201ENST00000594169 2163 ntBASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AMBRA1Q9C0C7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 Z98257.2-202ENST00000641138 1548 ntBASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 AK2P2-201ENST00000439142 405 ntBASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 CTBP2P5-201ENST00000454986 1264 ntBASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 AC079316.1-201ENST00000548397 411 ntBASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RHOXF1P1-202ENST00000635473 501 ntBASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 COX11-210ENST00000639671 696 ntBASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 AL022323.5-201ENST00000624101 2059 ntBASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms