Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SRPXP78539 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRPXP78539 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRPXP78539 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRPXP78539 AC107375.1-201ENST00000564464 2231 ntBASIC11.74□□□□□ -0.53
SRPXP78539 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRPXP78539 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.74□□□□□ -0.53
SRPXP78539 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SRPXP78539 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SRPXP78539 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.74□□□□□ -0.53
SRPXP78539 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SRPXP78539 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.73□□□□□ -0.53
SRPXP78539 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.73□□□□□ -0.53
SRPXP78539 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 AC004890.2-204ENST00000481968 304 ntBASIC11.73□□□□□ -0.53
SRPXP78539 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.73□□□□□ -0.53
SRPXP78539 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.73□□□□□ -0.53
SRPXP78539 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SRPXP78539 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.73□□□□□ -0.53
SRPXP78539 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.73□□□□□ -0.53
SRPXP78539 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 AL671883.3-201ENST00000603274 991 ntBASIC11.73□□□□□ -0.53
SRPXP78539 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.73□□□□□ -0.53
SRPXP78539 AC079781.4-201ENST00000641908 219 ntBASIC11.73□□□□□ -0.53
SRPXP78539 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.73□□□□□ -0.53
SRPXP78539 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRPXP78539 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SRPXP78539 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.72□□□□□ -0.53
SRPXP78539 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.72□□□□□ -0.53
SRPXP78539 AC020917.4-201ENST00000623994 1999 ntBASIC11.72□□□□□ -0.53
SRPXP78539 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.72□□□□□ -0.53
SRPXP78539 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.72□□□□□ -0.53
SRPXP78539 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SRPXP78539 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRPXP78539 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SRPXP78539 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms