Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.84□□□□□ -0.35
CASP6P55212 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CASP6P55212 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.84□□□□□ -0.35
CASP6P55212 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CASP6P55212 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CASP6P55212 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CASP6P55212 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CASP6P55212 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CASP6P55212 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CASP6P55212 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CASP6P55212 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CASP6P55212 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.83□□□□□ -0.35
CASP6P55212 STRCP1-201ENST00000509801 5328 ntBASIC12.83□□□□□ -0.35
CASP6P55212 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.83□□□□□ -0.36
CASP6P55212 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
CASP6P55212 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CASP6P55212 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.83□□□□□ -0.36
CASP6P55212 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.83□□□□□ -0.36
CASP6P55212 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.83□□□□□ -0.36
CASP6P55212 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CASP6P55212 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.83□□□□□ -0.36
CASP6P55212 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.83□□□□□ -0.36
CASP6P55212 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.83□□□□□ -0.36
CASP6P55212 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.83□□□□□ -0.36
CASP6P55212 AC018638.5-201ENST00000450885 754 ntBASIC12.83□□□□□ -0.36
CASP6P55212 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CASP6P55212 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.83□□□□□ -0.36
CASP6P55212 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 AC005586.2-201ENST00000563946 837 ntBASIC12.83□□□□□ -0.36
CASP6P55212 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.83□□□□□ -0.36
CASP6P55212 RN7SL665P-201ENST00000578793 300 ntBASIC12.83□□□□□ -0.36
CASP6P55212 MIR2392-201ENST00000584881 84 ntBASIC12.83□□□□□ -0.36
CASP6P55212 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.83□□□□□ -0.36
CASP6P55212 AC090386.2-201ENST00000623010 1039 ntBASIC12.83□□□□□ -0.36
CASP6P55212 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CASP6P55212 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CASP6P55212 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.83□□□□□ -0.36
CASP6P55212 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 AC136621.1-201ENST00000624017 2304 ntBASIC12.83□□□□□ -0.36
CASP6P55212 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.83□□□□□ -0.36
CASP6P55212 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.83□□□□□ -0.36
CASP6P55212 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CASP6P55212 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CASP6P55212 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CASP6P55212 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CASP6P55212 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CASP6P55212 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CASP6P55212 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.82□□□□□ -0.36
CASP6P55212 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.82□□□□□ -0.36
CASP6P55212 PSMD4P1-201ENST00000433951 1109 ntBASIC12.82□□□□□ -0.36
CASP6P55212 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CASP6P55212 AC024293.1-201ENST00000467930 498 ntBASIC12.82□□□□□ -0.36
CASP6P55212 RN7SL767P-201ENST00000493013 295 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms