Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1EP49674 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1EP49674 AC097376.2-205ENST00000610159 5334 ntBASIC13.8□□□□□ -0.2
CSNK1EP49674 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1EP49674 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CSNK1EP49674 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1EP49674 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CSNK1EP49674 KRT18P4-201ENST00000422599 1288 ntBASIC13.79□□□□□ -0.2
CSNK1EP49674 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC13.79□□□□□ -0.2
CSNK1EP49674 AP000244.1-201ENST00000424582 201 ntBASIC13.79□□□□□ -0.2
CSNK1EP49674 AL512599.1-201ENST00000430724 685 ntBASIC13.79□□□□□ -0.2
CSNK1EP49674 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 KRT18P15-201ENST00000458108 1291 ntBASIC13.79□□□□□ -0.2
CSNK1EP49674 TPT1P11-201ENST00000458482 498 ntBASIC13.79□□□□□ -0.2
CSNK1EP49674 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1EP49674 CISD2-202ENST00000503643 808 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 GDNF-207ENST00000515058 764 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
CSNK1EP49674 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1EP49674 RN7SL556P-201ENST00000582856 298 ntBASIC13.79□□□□□ -0.2
CSNK1EP49674 EIF5AP2-201ENST00000585668 1047 ntBASIC13.79□□□□□ -0.2
CSNK1EP49674 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1EP49674 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 AC117503.4-201ENST00000623229 1418 ntBASIC13.79□□□□□ -0.2
CSNK1EP49674 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1EP49674 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1EP49674 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1EP49674 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1EP49674 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1EP49674 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1EP49674 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1EP49674 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1EP49674 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1EP49674 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1EP49674 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1EP49674 AC073210.1-201ENST00000414799 232 ntBASIC13.78□□□□□ -0.2
CSNK1EP49674 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1EP49674 PSAT1P2-201ENST00000426107 972 ntBASIC13.78□□□□□ -0.2
CSNK1EP49674 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1EP49674 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms