Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL4P13236 FAM21EP-201ENST00000417804 985 ntBASIC13.24□□□□□ -0.29
CCL4P13236 KRT18P4-201ENST00000422599 1288 ntBASIC13.24□□□□□ -0.29
CCL4P13236 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL4P13236 AP000244.1-201ENST00000424582 201 ntBASIC13.24□□□□□ -0.29
CCL4P13236 AL512599.1-201ENST00000430724 685 ntBASIC13.24□□□□□ -0.29
CCL4P13236 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL4P13236 EEF1DP2-201ENST00000433698 843 ntBASIC13.24□□□□□ -0.29
CCL4P13236 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL4P13236 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL4P13236 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 COQ10BP2-201ENST00000513804 724 ntBASIC13.24□□□□□ -0.29
CCL4P13236 BAK1P2-201ENST00000532665 631 ntBASIC13.24□□□□□ -0.29
CCL4P13236 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL4P13236 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL4P13236 ABHD17AP9-201ENST00000561925 548 ntBASIC13.24□□□□□ -0.29
CCL4P13236 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL4P13236 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL4P13236 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.24□□□□□ -0.29
CCL4P13236 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL4P13236 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL4P13236 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL4P13236 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 AC015802.1-201ENST00000588104 1449 ntBASIC13.23□□□□□ -0.29
CCL4P13236 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CCL4P13236 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 ABCD1P4-201ENST00000399687 604 ntBASIC13.23□□□□□ -0.29
CCL4P13236 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.23□□□□□ -0.29
CCL4P13236 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 HLA-DPA2-205ENST00000433582 733 ntBASIC13.23□□□□□ -0.29
CCL4P13236 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL4P13236 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 AC092903.1-201ENST00000466506 262 ntBASIC13.23□□□□□ -0.29
CCL4P13236 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 CISD2-202ENST00000503643 808 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 AC092862.1-201ENST00000541534 533 ntBASIC13.23□□□□□ -0.29
CCL4P13236 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL4P13236 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL4P13236 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL4P13236 AL136982.5-201ENST00000605222 294 ntBASIC13.23□□□□□ -0.29
CCL4P13236 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CCL4P13236 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL4P13236 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL4P13236 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms