Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TIMP1P01033 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC14.97□□□□□ -0.01
TIMP1P01033 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 TPT1P9-201ENST00000413759 514 ntBASIC14.97□□□□□ -0.01
TIMP1P01033 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC14.97□□□□□ -0.01
TIMP1P01033 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.97□□□□□ -0.01
TIMP1P01033 AC007279.1-201ENST00000448547 837 ntBASIC14.97□□□□□ -0.01
TIMP1P01033 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 AC090820.1-201ENST00000519722 591 ntBASIC14.97□□□□□ -0.01
TIMP1P01033 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 PCTP-206ENST00000573500 919 ntTSL 3 BASIC14.97□□□□□ -0.01
TIMP1P01033 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC14.97□□□□□ -0.01
TIMP1P01033 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.97□□□□□ -0.01
TIMP1P01033 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TIMP1P01033 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 KRT8P42-201ENST00000405771 1399 ntBASIC14.97□□□□□ -0.01
TIMP1P01033 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TIMP1P01033 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.96□□□□□ -0.01
TIMP1P01033 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TIMP1P01033 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TIMP1P01033 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TIMP1P01033 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC14.96□□□□□ -0.01
TIMP1P01033 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.96□□□□□ -0.01
TIMP1P01033 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC14.96□□□□□ -0.01
TIMP1P01033 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TIMP1P01033 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 OR4C14P-201ENST00000440929 923 ntBASIC14.96□□□□□ -0.01
TIMP1P01033 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TIMP1P01033 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.96□□□□□ -0.01
TIMP1P01033 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
TIMP1P01033 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 RNA5SP288-201ENST00000516075 93 ntBASIC14.96□□□□□ -0.01
TIMP1P01033 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TIMP1P01033 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC14.96□□□□□ -0.01
TIMP1P01033 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.96□□□□□ -0.01
TIMP1P01033 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TIMP1P01033 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.96□□□□□ -0.01
TIMP1P01033 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.96□□□□□ -0.02
TIMP1P01033 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TIMP1P01033 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.96□□□□□ -0.02
TIMP1P01033 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
TIMP1P01033 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TIMP1P01033 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.96□□□□□ -0.02
TIMP1P01033 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
TIMP1P01033 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TIMP1P01033 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.95□□□□□ -0.02
TIMP1P01033 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.95□□□□□ -0.02
TIMP1P01033 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TIMP1P01033 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.95□□□□□ -0.02
TIMP1P01033 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TIMP1P01033 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMP1P01033 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TIMP1P01033 AC073347.1-201ENST00000421633 2643 ntBASIC14.95□□□□□ -0.02
TIMP1P01033 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms