Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 OS9-218ENST00000551035 2246 ntTSL 2 BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
HLA-DRB4X5D2U9 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 BTBD6P1-201ENST00000412176 1267 ntBASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 TUBB8P8-201ENST00000458717 1058 ntBASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 FAM86HP-204ENST00000513466 959 ntBASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 MIR4783-201ENST00000580343 82 ntBASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 Z98259.2-201ENST00000641583 609 ntBASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 AC004241.5-201ENST00000623870 2448 ntBASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HLA-DRB4X5D2U9 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 REXO1L6P-201ENST00000603433 1515 ntBASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 RPSAP36-202ENST00000494591 1261 ntBASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms