Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 Z98257.2-202ENST00000641138 1548 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 RCC2P1-201ENST00000452257 1476 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 CD8B2-202ENST00000417670 633 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 PTP4A1P2-201ENST00000546033 454 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 DUT-210ENST00000559935 569 ntTSL 3 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 CTBP2P3-201ENST00000585629 1255 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ECM1P1-201ENST00000604092 1279 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 LINC00567-201ENST00000569854 3409 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AC108024.1-201ENST00000626286 1721 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AL118506.1-201ENST00000601296 3082 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AC073862.5-201ENST00000624129 2027 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 AL590824.1-201ENST00000403828 1349 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 HMGA1P1-201ENST00000415560 1062 ntBASIC9.92□□□□□ -0.82
UBE2D4Q9Y2X8 FAM8A4P-201ENST00000435433 1213 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms