Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 MIR339-201ENST00000362153 94 ntBASIC14.98□□□□□ -0.01
HERVK_113Q902F9 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 MIR632-201ENST00000385193 94 ntBASIC14.98□□□□□ -0.01
HERVK_113Q902F9 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.98□□□□□ -0.01
HERVK_113Q902F9 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 AC079250.1-201ENST00000456046 531 ntBASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SNRPD2P2-201ENST00000473818 333 ntBASIC14.98□□□□□ -0.01
HERVK_113Q902F9 AC108724.1-201ENST00000481669 352 ntBASIC14.98□□□□□ -0.01
HERVK_113Q902F9 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 GYG1-209ENST00000483267 801 ntTSL 2 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERVK_113Q902F9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AC018529.2-202ENST00000611482 3087 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 RN7SKP212-201ENST00000410851 328 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 PGK1P2-201ENST00000431702 1214 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AL356000.1-201ENST00000441073 1238 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 RN7SL672P-201ENST00000474091 317 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AC023051.2-201ENST00000541141 460 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 ACTBP9-201ENST00000587663 1099 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AC006986.1-201ENST00000612764 241 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 BX322562.1-201ENST00000617004 561 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AC026120.2-201ENST00000617239 309 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 AC064850.1-201ENST00000413279 1398 ntBASIC14.97□□□□□ -0.01
HERVK_113Q902F9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERVK_113Q902F9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms