Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 AC061965.1-201ENST00000560524 1465 ntBASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMARCC2Q8TAQ2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMARCC2Q8TAQ2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 AL359845.1-201ENST00000458202 1648 ntBASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 SALL4P6-201ENST00000429385 1691 ntBASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 AL137784.3-201ENST00000623858 2288 ntBASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMARCC2Q8TAQ2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 AL590824.1-201ENST00000403828 1349 ntBASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 AC239868.1-201ENST00000369385 493 ntBASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 TSPY25P-201ENST00000429463 745 ntBASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 AC006335.1-201ENST00000445200 547 ntBASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 NUP210P1-202ENST00000504322 710 ntBASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.57■□□□□ 0.24
SMARCC2Q8TAQ2 AC091812.3-201ENST00000621362 345 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms