Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 TPT1P9-201ENST00000413759 514 ntBASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 RPSAP16-201ENST00000447583 821 ntBASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 BICD1P1-201ENST00000457832 1222 ntBASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 CETN3-205ENST00000522842 664 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 MFSD12-215ENST00000615613 688 ntBASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 BX322562.1-201ENST00000617004 561 ntBASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 GSN-203ENST00000373808 2664 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDC42BPAQ5VT25 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 MIR339-201ENST00000362153 94 ntBASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 TLE2-205ENST00000586422 389 ntTSL 5 BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 MDC1-209ENST00000613547 830 ntTSL 5 BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 DBET-201ENST00000630918 3363 ntBASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 MKRN7P-201ENST00000433469 1371 ntBASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CDC42BPAQ5VT25 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 ISL1-203ENST00000511384 981 ntTSL 5 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 AP001120.3-201ENST00000585729 489 ntBASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 AC087072.1-201ENST00000603727 421 ntBASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 ATF4P4-201ENST00000393544 1930 ntBASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC42BPAQ5VT25 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 AP001331.1-201ENST00000413008 1015 ntBASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 KRT18P42-201ENST00000505048 1255 ntBASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 AC106881.1-201ENST00000605849 3329 ntBASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms